RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-212ENST00000616550 ZNF785A8K8V0 405 aa16.74■□□□□ 0.27
CBWD3-212ENST00000616550 INS-IGF2F8WCM5 200 aa16.74■□□□□ 0.27
CBWD3-212ENST00000616550 I3L2K1 104 aa16.74■□□□□ 0.27
CBWD3-212ENST00000616550 MT-CO2P00403 227 aa16.74■□□□□ 0.27
CBWD3-212ENST00000616550 HOXA1P49639 335 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-212ENST00000616550 SUB1P53999 127 aaKnown RBP eCLIP16.74■□□□□ 0.27
CBWD3-212ENST00000616550 MFAP4P55083 255 aa16.74■□□□□ 0.27
CBWD3-212ENST00000616550 ZNF79Q15937 498 aa16.74■□□□□ 0.27
CBWD3-212ENST00000616550 SPANXN2Q5MJ10 180 aa16.74■□□□□ 0.27
CBWD3-212ENST00000616550 TMEM268Q5VZI3 342 aa16.74■□□□□ 0.27
CBWD3-212ENST00000616550 ZNF57Q68EA5 555 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-212ENST00000616550 LHFPL5Q8TAF8 219 aa16.74■□□□□ 0.27
CBWD3-212ENST00000616550 TRIM63Q969Q1 353 aa16.74■□□□□ 0.27
CBWD3-212ENST00000616550 MRPL27Q9P0M9 148 aaKnown RBP16.74■□□□□ 0.27
CBWD3-212ENST00000616550 F8W735 103 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-212ENST00000616550 NDUFA4O00483 81 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 AKR1C4P17516 323 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 Q6ZRM9 215 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 TMEM230Q96A57 120 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 PINX1Q96BK5 328 aaKnown RBP16.73■□□□□ 0.27
CBWD3-212ENST00000616550 GALNT14Q96FL9 552 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 WWC2-AS2Q96NR7 200 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 TXN2Q99757 166 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 CHRDL1Q9BU40 450 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 TUBA4BQ9H853 241 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 C19orf73Q9NVV2 129 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 TMEM56-RWDD3S4R434 201 aa16.73■□□□□ 0.27
CBWD3-212ENST00000616550 NUPL2O15504 423 aaKnown RBP16.72■□□□□ 0.27
CBWD3-212ENST00000616550 C8orf88P0DMB2 117 aa16.72■□□□□ 0.27
CBWD3-212ENST00000616550 CD81P60033 236 aa16.72■□□□□ 0.27
CBWD3-212ENST00000616550 SPCS3P61009 180 aa16.72■□□□□ 0.27
CBWD3-212ENST00000616550 TMEM190Q8WZ59 177 aa16.72■□□□□ 0.27
CBWD3-212ENST00000616550 GPR146Q96CH1 333 aa16.72■□□□□ 0.27
CBWD3-212ENST00000616550 MLXQ9UH92 298 aa16.72■□□□□ 0.27
CBWD3-212ENST00000616550 SELENOKQ9Y6D0 94 aa16.72■□□□□ 0.27
CBWD3-212ENST00000616550 CTSGP08311 255 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 ADMP35318 185 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 RELQ04864 619 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-212ENST00000616550 TMEM187Q14656 261 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 BTNL8Q6UX41 500 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 OR52E5Q8NH55 327 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 DEDD2Q8WXF8 326 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 IL22RA2Q969J5 263 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 WDR89Q96FK6 387 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-212ENST00000616550 NEURL2Q9BR09 285 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 C20orf24Q9BUV8 137 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 ZMAT4Q9H898 229 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 DAZ1Q9NQZ3 744 aaKnown RBP16.71■□□□□ 0.27
CBWD3-212ENST00000616550 CACNG5Q9UF02 275 aa16.71■□□□□ 0.27
CBWD3-212ENST00000616550 CORTO00230 105 aa16.7■□□□□ 0.26
CBWD3-212ENST00000616550 IGHV3-48P01763 117 aa16.7■□□□□ 0.26
CBWD3-212ENST00000616550 ANXA3P12429 323 aa16.7■□□□□ 0.26
CBWD3-212ENST00000616550 FCGR2BP31994 310 aaPredicted RBP16.7■□□□□ 0.26
CBWD3-212ENST00000616550 TMEM61Q8N0U2 210 aa16.7■□□□□ 0.26
CBWD3-212ENST00000616550 DNAH9Q9NYC9 4486 aa16.7■□□□□ 0.26
CBWD3-212ENST00000616550 GNG7O60262 68 aa16.69■□□□□ 0.26
CBWD3-212ENST00000616550 RNASE2P10153 161 aaKnown RBP16.69■□□□□ 0.26
CBWD3-212ENST00000616550 AARDQ4LEZ3 155 aa16.69■□□□□ 0.26
CBWD3-212ENST00000616550 RBPMS2Q6ZRY4 209 aaKnown RBP16.69■□□□□ 0.26
CBWD3-212ENST00000616550 DUSP18Q8NEJ0 188 aa16.69■□□□□ 0.26
CBWD3-212ENST00000616550 PRR13Q9NZ81 148 aa16.69■□□□□ 0.26
CBWD3-212ENST00000616550 NDUFA13Q9P0J0 144 aa16.69■□□□□ 0.26
CBWD3-212ENST00000616550 CACFD1Q9UGQ2 172 aa16.69■□□□□ 0.26
CBWD3-212ENST00000616550 TRAV25A0A0B4J276 109 aa16.68■□□□□ 0.26
CBWD3-212ENST00000616550 CD7P09564 240 aa16.68■□□□□ 0.26
CBWD3-212ENST00000616550 NPBWR1P48145 328 aa16.68■□□□□ 0.26
CBWD3-212ENST00000616550 ANKRD55Q3KP44 614 aa16.68■□□□□ 0.26
CBWD3-212ENST00000616550 SLC16A13Q7RTY0 426 aa16.68■□□□□ 0.26
CBWD3-212ENST00000616550 TMED4Q7Z7H5 227 aa16.68■□□□□ 0.26
CBWD3-212ENST00000616550 SRRQ9GZT4 340 aa16.68■□□□□ 0.26
CBWD3-212ENST00000616550 IGHV3OR16-8A0A075B7F1 116 aa16.67■□□□□ 0.26
CBWD3-212ENST00000616550 K7EMT4 169 aa16.67■□□□□ 0.26
CBWD3-212ENST00000616550 YIF1AO95070 293 aa16.67■□□□□ 0.26
CBWD3-212ENST00000616550 SCAF4O95104 1147 aaKnown RBP16.67■□□□□ 0.26
CBWD3-212ENST00000616550 SULT1A3P0DMM9 295 aa16.67■□□□□ 0.26
CBWD3-212ENST00000616550 SULT1A4P0DMN0 295 aa16.67■□□□□ 0.26
CBWD3-212ENST00000616550 INPP1P49441 399 aa16.67■□□□□ 0.26
CBWD3-212ENST00000616550 SUPT4H1P63272 117 aaKnown RBP16.67■□□□□ 0.26
CBWD3-212ENST00000616550 SRPXP78539 464 aa16.67■□□□□ 0.26
CBWD3-212ENST00000616550 PVRIGQ6DKI7 326 aa16.67■□□□□ 0.26
CBWD3-212ENST00000616550 LGI3Q8N145 548 aa16.67■□□□□ 0.26
CBWD3-212ENST00000616550 RCHY1Q96PM5 261 aa16.67■□□□□ 0.26
CBWD3-212ENST00000616550 SLC25A21Q9BQT8 299 aaPredicted RBP16.67■□□□□ 0.26
CBWD3-212ENST00000616550 HEYLQ9NQ87 328 aaPredicted RBP16.67■□□□□ 0.26
CBWD3-212ENST00000616550 A0A0B4J2A0 478 aa16.66■□□□□ 0.26
CBWD3-212ENST00000616550 PIGBOS1A0A0B4J2F0 54 aa16.66■□□□□ 0.26
CBWD3-212ENST00000616550 C15orf62A8K5M9 175 aa16.66■□□□□ 0.26
CBWD3-212ENST00000616550 CEBPZOSA8MTT3 80 aa16.66■□□□□ 0.26
CBWD3-212ENST00000616550 OR11H12B2RN74 326 aa16.66■□□□□ 0.26
CBWD3-212ENST00000616550 TMEM128Q5BJH2 165 aa16.66■□□□□ 0.26
CBWD3-212ENST00000616550 OR52B4Q8NGK2 314 aa16.66■□□□□ 0.26
CBWD3-212ENST00000616550 SHPKQ9UHJ6 478 aa16.66■□□□□ 0.26
CBWD3-212ENST00000616550 ZNF207O43670 478 aaKnown RBP16.65■□□□□ 0.26
CBWD3-212ENST00000616550 OPRK1P41145 380 aa16.65■□□□□ 0.26
CBWD3-212ENST00000616550 HTR2BP41595 481 aa16.65■□□□□ 0.26
CBWD3-212ENST00000616550 TRIQKQ629K1 86 aa16.65■□□□□ 0.26
CBWD3-212ENST00000616550 LAMTOR1Q6IAA8 161 aa16.65■□□□□ 0.26
CBWD3-212ENST00000616550 TM2D3Q9BRN9 247 aa16.65■□□□□ 0.26
CBWD3-212ENST00000616550 CCR6P51684 374 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms