RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 IL34Q6ZMJ4 242 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 FAM213BQ8TBF2 198 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 CACNG8Q8WXS5 425 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 NPCDR1Q9BY65 106 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 C1RLQ9NZP8 487 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 CSPG4Q6UVK1 2322 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 ABCA1O95477 2261 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 APCP25054 2843 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 NCBP2LA6PVI3 153 aaKnown RBP7.09□□□□□ -1.27
CCDC47-207ENST00000612558 SOX15O60248 233 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 TSPAN15O95858 294 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 MBP02144 154 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 ADMP35318 185 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 GPX4P36969 197 aaPredicted RBP7.09□□□□□ -1.27
CCDC47-207ENST00000612558 SSBP2P81877 361 aaPredicted RBP7.09□□□□□ -1.27
CCDC47-207ENST00000612558 FBLN7Q53RD9 439 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 TMEM41BQ5BJD5 291 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 RUSC1-AS1Q66K80 236 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 UQCC3Q6UW78 93 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 ZNF562Q6V9R5 426 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 COMMD1Q8N668 190 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 ZNF114Q8NC26 417 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 RNASEH2CQ8TDP1 164 aaKnown RBP7.09□□□□□ -1.27
CCDC47-207ENST00000612558 SRSF12Q8WXF0 261 aaKnown RBP7.09□□□□□ -1.27
CCDC47-207ENST00000612558 P2RX4Q99571 388 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 MEGF9Q9H1U4 602 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 RPRMQ9NS64 109 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 CREBBPQ92793 2442 aa7.09□□□□□ -1.27
CCDC47-207ENST00000612558 IGHV3OR16-10A0A075B7F0 116 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 TEX22C9J3V5 150 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 I3L521 148 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 J3QLI3 93 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 IGHV4-38-2P0DP08 117 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 CD69Q07108 199 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 RAB31Q13636 194 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 FXYD3Q14802 87 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 FAM120AOSQ5T036 256 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 PVRIGQ6DKI7 326 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 HIST2H2BCQ6DN03 193 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 TEPPQ6URK8 271 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 BRD3OSQ6XYD6 125 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 TMEM144Q7Z5S9 345 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 LSM4Q9Y4Z0 139 aaKnown RBP7.08□□□□□ -1.28
CCDC47-207ENST00000612558 SVEP1Q4LDE5 3571 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 CSMD2Q7Z408 3487 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 BTBD17A6NE02 478 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 CORTO00230 105 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 TGFAP01135 160 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 HBE1P02100 147 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 REG1AP05451 166 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 AREGP15514 252 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 OPRK1P41145 380 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 ELLP55199 621 aaPredicted RBP7.08□□□□□ -1.28
CCDC47-207ENST00000612558 RAB2AP61019 212 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 CX3CL1P78423 397 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 AKR1C1Q04828 323 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 GAMTQ14353 236 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 FFAR4Q5NUL3 377 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 LFNGQ8NES3 379 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 OR1P1Q8NH06 330 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 SSMEM1Q8WWF3 244 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 MGST2Q99735 147 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 VSIRQ9H7M9 311 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 KCNIP2Q9NS61 270 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 FAM96BQ9Y3D0 163 aa7.08□□□□□ -1.28
CCDC47-207ENST00000612558 PRRC2AP48634 2157 aaKnown RBP7.07□□□□□ -1.28
CCDC47-207ENST00000612558 TRAV1-1A0A0B4J248 108 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 A0A0U1RQK1 487 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 KRBOX1C9JBD0 128 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 AGPAT2O15120 278 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 TSPAN9O75954 239 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 IGHV4-31P0DP07 118 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 BPIFB3P59826 476 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 MLANAQ16655 118 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 TMEM249Q2WGJ8 235 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 ACOT6Q3I5F7 207 aaPredicted RBP7.07□□□□□ -1.28
CCDC47-207ENST00000612558 KLF17Q5JT82 389 aaPredicted RBP7.07□□□□□ -1.28
CCDC47-207ENST00000612558 TOR2AQ5JU69 321 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 ETFRF1Q6IPR1 90 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 ACSM6Q6P461 480 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 SLC16A13Q7RTY0 426 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 Q8N9W7 124 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 MAPK1IP1LQ8NDC0 245 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 OR1L6Q8NGR2 347 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 ABHD5Q8WTS1 349 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 SFT2D1Q8WV19 159 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 MBD3L1Q8WWY6 194 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 MISP3Q96FF7 219 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 SLC35E1Q96K37 410 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 Q96MF0 132 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 RASL11BQ9BPW5 248 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 GGTLC1Q9BX51 225 aa7.07□□□□□ -1.28
CCDC47-207ENST00000612558 F11RQ9Y624 299 aaKnown RBP7.07□□□□□ -1.28
CCDC47-207ENST00000612558 CR1P17927 2039 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 CYB5BO43169 146 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 HLA-DRB1P01911 266 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 FBP1P09467 338 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 APELAP0DMC3 54 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 M6PRP20645 277 aa7.06□□□□□ -1.28
CCDC47-207ENST00000612558 RPL29P47914 159 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms