RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PGPEP1LA6NFU8 196 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 SHISA9B4DS77 424 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 C2CD4DB7Z1M9 353 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 J3KRW8 73 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 K7EQM0 130 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 KIR2DS3K7RE56 304 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 M0R135 149 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 SLC25A17O43808 307 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 ANGPTL7O43827 346 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 EFNA2O43921 213 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 AGFG2O95081 481 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 LEPROTL1O95214 131 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 CLDN14O95500 239 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 CRYAAP02489 173 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 P04436 131 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 CA3P07451 260 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 ELANEP08246 267 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 SMIM13P0DJ93 91 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 CCL2P13500 99 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 EGR1P18146 543 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 NTF3P20783 257 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 ATP5IP56385 69 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 PMP22Q01453 160 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 SMAGPQ0VAQ4 97 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 GAGE5Q13069 117 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 GAGE6Q13070 117 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 EIF4EBP1Q13541 118 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 KIR2DS5Q14953 304 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 GABRA6Q16445 453 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 LTC4SQ16873 150 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 PIGYQ3MUY2 71 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 KIAA1644Q3SXP7 199 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 CT83Q5H943 113 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 Q5PR19 223 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 Q6P435 159 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 INO80CQ6PI98 192 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 PARM1Q6UWI2 310 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 ADAMTSL5Q6ZMM2 481 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 SHISA6Q6ZSJ9 500 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 MKXQ8IYA7 352 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZDHHC23Q8IYP9 409 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 ATOH7Q8N100 152 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 TMEM251Q8N6I4 163 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 GATD1Q8NB37 220 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 OR2T6Q8NHC8 308 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 C8orf46Q8TAG6 207 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZNF502Q8TBZ5 544 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 TMEM190Q8WZ59 177 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 NABP1Q96AH0 204 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZNF799Q96GE5 643 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 PHF7Q9BWX1 381 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 HEYLQ9NQ87 328 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 SPANXB1Q9NS25 103 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 IDI2-AS1Q9NZ38 188 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 DEC1Q9P2X7 70 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 C19orf25Q9UFG5 118 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 ERRFI1Q9UJM3 462 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 ERG28Q9UKR5 140 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 LSM4Q9Y4Z0 139 aaKnown RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 YTHDF2Q9Y5A9 579 aaKnown RBP3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 SPCS1Q9Y6A9 102 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 PRRC2BQ5JSZ5 2229 aaKnown RBP3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 CEP192Q8TEP8 1941 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 A0A087X0K7 114 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZNF816-ZNF321PA0A0X1KG74 233 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 hCG_38984A0A1B0GV85 526 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 hDV102S1A0JD36 115 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 A1L4Q6 167 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 MANSC4A6NHS7 340 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 C15orf62A8K5M9 175 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 VWC2LB2RUY7 222 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 PRSS46E5RG02 174 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 E9PLD3 99 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 H3BUT2 72 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 TNFRSF13BO14836 293 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 SPRY1O43609 319 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 SYNGR3O43761 229 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 CLDN1O95832 211 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 IGHV3-7P01780 117 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 ARL14EPLP0DKL9 152 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 IGFBP2P18065 325 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 CDAP32320 146 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 FOXA3P55318 350 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 TCL1AP56279 114 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 YPEL5P62699 121 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 ARF1P84077 181 aaKnown RBP3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 TFF3Q07654 80 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 PLCXD2Q0VAA5 305 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 PDCD1Q15116 288 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 CST6Q15828 149 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 NNATQ16517 81 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 TAL2Q16559 108 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 LGALS9BQ3B8N2 356 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 IBA57Q5T440 356 aaKnown RBP3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 LGALS9CQ6DKI2 356 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 PQLC2Q6ZP29 291 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 S100A7AQ86SG5 101 aa3.31□□□□□ -1.88
HMGB1P50-201ENST00000605814 OOSP2Q86WS3 158 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms