RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 MARC2Q969Z3 335 aa17.04■□□□□ 0.32
CCDC9-204ENST00000599398 SCGB3A2Q96PL1 93 aa17.04■□□□□ 0.32
CCDC9-204ENST00000599398 RCHY1Q96PM5 261 aa17.04■□□□□ 0.32
CCDC9-204ENST00000599398 NEURL2Q9BR09 285 aa17.04■□□□□ 0.32
CCDC9-204ENST00000599398 RBM38Q9H0Z9 239 aaKnown RBP17.04■□□□□ 0.32
CCDC9-204ENST00000599398 ENY2Q9NPA8 101 aa17.04■□□□□ 0.32
CCDC9-204ENST00000599398 TENM3Q9P273 2699 aa17.03■□□□□ 0.32
CCDC9-204ENST00000599398 F8W735 103 aaPredicted RBP17.03■□□□□ 0.32
CCDC9-204ENST00000599398 MT-CO2P00403 227 aa17.03■□□□□ 0.32
CCDC9-204ENST00000599398 IGHV3-48P01763 117 aa17.03■□□□□ 0.32
CCDC9-204ENST00000599398 ETV6P41212 452 aa17.03■□□□□ 0.32
CCDC9-204ENST00000599398 MFAP4P55083 255 aa17.03■□□□□ 0.32
CCDC9-204ENST00000599398 ELLP55199 621 aaPredicted RBP17.03■□□□□ 0.32
CCDC9-204ENST00000599398 FAM219AQ8IW50 185 aa17.03■□□□□ 0.32
CCDC9-204ENST00000599398 TMEM61Q8N0U2 210 aa17.03■□□□□ 0.32
CCDC9-204ENST00000599398 LHFPL5Q8TAF8 219 aa17.03■□□□□ 0.32
CCDC9-204ENST00000599398 TMEM190Q8WZ59 177 aa17.03■□□□□ 0.32
CCDC9-204ENST00000599398 C20orf24Q9BUV8 137 aa17.03■□□□□ 0.32
CCDC9-204ENST00000599398 GAR1Q9NY12 217 aaKnown RBP17.03■□□□□ 0.32
CCDC9-204ENST00000599398 MRPL27Q9P0M9 148 aaKnown RBP17.03■□□□□ 0.32
CCDC9-204ENST00000599398 HUWE1Q7Z6Z7 4374 aaKnown RBP17.03■□□□□ 0.32
CCDC9-204ENST00000599398 I3L2K1 104 aa17.02■□□□□ 0.32
CCDC9-204ENST00000599398 NDUFA4O00483 81 aa17.02■□□□□ 0.32
CCDC9-204ENST00000599398 CD7P09564 240 aa17.02■□□□□ 0.32
CCDC9-204ENST00000599398 ADMP35318 185 aa17.02■□□□□ 0.32
CCDC9-204ENST00000599398 FAUP35544 74 aaKnown RBP17.02■□□□□ 0.32
CCDC9-204ENST00000599398 TMEM268Q5VZI3 342 aa17.02■□□□□ 0.32
CCDC9-204ENST00000599398 SELENOHQ8IZQ5 122 aaKnown RBP17.02■□□□□ 0.32
CCDC9-204ENST00000599398 V9GYH0 126 aa17.02■□□□□ 0.32
CCDC9-204ENST00000599398 IGHV3OR16-8A0A075B7F1 116 aa17.01■□□□□ 0.31
CCDC9-204ENST00000599398 NUPL2O15504 423 aaKnown RBP17.01■□□□□ 0.31
CCDC9-204ENST00000599398 SCAF4O95104 1147 aaKnown RBP17.01■□□□□ 0.31
CCDC9-204ENST00000599398 C8orf88P0DMB2 117 aa17.01■□□□□ 0.31
CCDC9-204ENST00000599398 AP3S2P59780 193 aa17.01■□□□□ 0.31
CCDC9-204ENST00000599398 TOMM5Q8N4H5 51 aa17.01■□□□□ 0.31
CCDC9-204ENST00000599398 DAZ1Q9NQZ3 744 aaKnown RBP17.01■□□□□ 0.31
CCDC9-204ENST00000599398 KCNIP3Q9Y2W7 256 aa17.01■□□□□ 0.31
CCDC9-204ENST00000599398 ZNF701M0R085 212 aaPredicted RBP17■□□□□ 0.31
CCDC9-204ENST00000599398 CTSGP08311 255 aa17■□□□□ 0.31
CCDC9-204ENST00000599398 AKR1C4P17516 323 aa17■□□□□ 0.31
CCDC9-204ENST00000599398 SUB1P53999 127 aaKnown RBP eCLIP17■□□□□ 0.31
CCDC9-204ENST00000599398 Q6ZRM9 215 aa17■□□□□ 0.31
CCDC9-204ENST00000599398 RBPMS2Q6ZRY4 209 aaKnown RBP17■□□□□ 0.31
CCDC9-204ENST00000599398 TRIM63Q969Q1 353 aa17■□□□□ 0.31
CCDC9-204ENST00000599398 TXN2Q99757 166 aa17■□□□□ 0.31
CCDC9-204ENST00000599398 CTNNBIP1Q9NSA3 81 aaPredicted RBP17■□□□□ 0.31
CCDC9-204ENST00000599398 INS-IGF2F8WCM5 200 aa16.99■□□□□ 0.31
CCDC9-204ENST00000599398 ZNF207O43670 478 aaKnown RBP16.99■□□□□ 0.31
CCDC9-204ENST00000599398 GNG7O60262 68 aa16.99■□□□□ 0.31
CCDC9-204ENST00000599398 RELQ04864 619 aaPredicted RBP16.99■□□□□ 0.31
CCDC9-204ENST00000599398 KLF9Q13886 244 aaPredicted RBP16.99■□□□□ 0.31
CCDC9-204ENST00000599398 SLC16A13Q7RTY0 426 aa16.99■□□□□ 0.31
CCDC9-204ENST00000599398 DEFB125Q8N687 156 aa16.99■□□□□ 0.31
CCDC9-204ENST00000599398 TMEM230Q96A57 120 aa16.99■□□□□ 0.31
CCDC9-204ENST00000599398 TM2D3Q9BRN9 247 aa16.99■□□□□ 0.31
CCDC9-204ENST00000599398 WFDC10AQ9H1F0 79 aa16.99■□□□□ 0.31
CCDC9-204ENST00000599398 PRR13Q9NZ81 148 aa16.99■□□□□ 0.31
CCDC9-204ENST00000599398 CACNG5Q9UF02 275 aa16.99■□□□□ 0.31
CCDC9-204ENST00000599398 OR11H12B2RN74 326 aa16.98■□□□□ 0.31
CCDC9-204ENST00000599398 YIF1AO95070 293 aa16.98■□□□□ 0.31
CCDC9-204ENST00000599398 FCGR2BP31994 310 aaPredicted RBP16.98■□□□□ 0.31
CCDC9-204ENST00000599398 SPCS3P61009 180 aa16.98■□□□□ 0.31
CCDC9-204ENST00000599398 ZNF79Q15937 498 aa16.98■□□□□ 0.31
CCDC9-204ENST00000599398 HAGHQ16775 308 aa16.98■□□□□ 0.31
CCDC9-204ENST00000599398 CCDC190Q86UF4 302 aa16.98■□□□□ 0.31
CCDC9-204ENST00000599398 OR52B4Q8NGK2 314 aa16.98■□□□□ 0.31
CCDC9-204ENST00000599398 GPR146Q96CH1 333 aa16.98■□□□□ 0.31
CCDC9-204ENST00000599398 TMEM56-RWDD3S4R434 201 aa16.98■□□□□ 0.31
CCDC9-204ENST00000599398 RNASE2P10153 161 aaKnown RBP16.97■□□□□ 0.31
CCDC9-204ENST00000599398 TMEM187Q14656 261 aa16.97■□□□□ 0.31
CCDC9-204ENST00000599398 SPANXN2Q5MJ10 180 aa16.97■□□□□ 0.31
CCDC9-204ENST00000599398 DUSP18Q8NEJ0 188 aa16.97■□□□□ 0.31
CCDC9-204ENST00000599398 GALNT14Q96FL9 552 aa16.97■□□□□ 0.31
CCDC9-204ENST00000599398 SRD5A3Q9H8P0 318 aa16.97■□□□□ 0.31
CCDC9-204ENST00000599398 TRAV25A0A0B4J276 109 aa16.96■□□□□ 0.31
CCDC9-204ENST00000599398 CORTO00230 105 aa16.96■□□□□ 0.31
CCDC9-204ENST00000599398 NPBWR1P48145 328 aa16.96■□□□□ 0.31
CCDC9-204ENST00000599398 ANKRD55Q3KP44 614 aa16.96■□□□□ 0.31
CCDC9-204ENST00000599398 OR52E5Q8NH55 327 aa16.96■□□□□ 0.31
CCDC9-204ENST00000599398 IL22RA2Q969J5 263 aa16.96■□□□□ 0.31
CCDC9-204ENST00000599398 C15orf62A8K5M9 175 aa16.95■□□□□ 0.3
CCDC9-204ENST00000599398 K7EMT4 169 aa16.95■□□□□ 0.3
CCDC9-204ENST00000599398 ANXA3P12429 323 aa16.95■□□□□ 0.3
CCDC9-204ENST00000599398 AARDQ4LEZ3 155 aa16.95■□□□□ 0.3
CCDC9-204ENST00000599398 TMED4Q7Z7H5 227 aa16.95■□□□□ 0.3
CCDC9-204ENST00000599398 SPATA25Q9BR10 227 aa16.95■□□□□ 0.3
CCDC9-204ENST00000599398 HEYLQ9NQ87 328 aaPredicted RBP16.95■□□□□ 0.3
CCDC9-204ENST00000599398 CEBPZOSA8MTT3 80 aa16.94■□□□□ 0.3
CCDC9-204ENST00000599398 NXPH3O95157 252 aa16.94■□□□□ 0.3
CCDC9-204ENST00000599398 SULT1A3P0DMM9 295 aa16.94■□□□□ 0.3
CCDC9-204ENST00000599398 SULT1A4P0DMN0 295 aa16.94■□□□□ 0.3
CCDC9-204ENST00000599398 OPRK1P41145 380 aa16.94■□□□□ 0.3
CCDC9-204ENST00000599398 SUPT4H1P63272 117 aaKnown RBP16.94■□□□□ 0.3
CCDC9-204ENST00000599398 LAMTOR1Q6IAA8 161 aa16.94■□□□□ 0.3
CCDC9-204ENST00000599398 PVRIGQ6DKI7 326 aa16.93■□□□□ 0.3
CCDC9-204ENST00000599398 HTR2BP41595 481 aa16.92■□□□□ 0.3
CCDC9-204ENST00000599398 INPP1P49441 399 aa16.92■□□□□ 0.3
CCDC9-204ENST00000599398 SRPXP78539 464 aa16.92■□□□□ 0.3
CCDC9-204ENST00000599398 LYZL2Q7Z4W2 148 aa16.92■□□□□ 0.3
CCDC9-204ENST00000599398 LGI3Q8N145 548 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms