RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 COA4Q9NYJ1 87 aa12.37□□□□□ -0.43
SHKBP1-215ENST00000597649 FKBP11Q9NYL4 201 aa12.37□□□□□ -0.43
SHKBP1-215ENST00000597649 PRNDQ9UKY0 176 aa12.37□□□□□ -0.43
SHKBP1-215ENST00000597649 NSG2Q9Y328 171 aa12.37□□□□□ -0.43
SHKBP1-215ENST00000597649 TRAV3A0A0B4J244 114 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 A0A0B4J2A0 478 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 DUXBA0A1W2PPF3 345 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 MSGN1A6NI15 193 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 OR11H12B2RN74 326 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 LY6G6CO95867 125 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 IL6RP08887 468 aaPredicted RBP12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 OR9G9P0C7N8 305 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 RPL27AP46776 148 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 ANKRD55Q3KP44 614 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 LYZL2Q7Z4W2 148 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 OR52B4Q8NGK2 314 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 ZNF431Q8TF32 576 aaPredicted RBP12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 LSM10Q969L4 123 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 SEC22CQ9BRL7 303 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 SHPKQ9UHJ6 478 aa12.36□□□□□ -0.43
SHKBP1-215ENST00000597649 PRAF2O60831 178 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 IFNA21P01568 189 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 PRH1P02810 166 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 IL5P05113 134 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 OR2B8PP59922 312 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 LRTM2Q8N967 370 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 UXS1Q8NBZ7 420 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 SRSF12Q8WXF0 261 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 FYTTD1Q96QD9 318 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 SPIN2AQ99865 258 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 SPIN2BQ9BPZ2 258 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 MARVELD1Q9BSK0 173 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 PDCD10Q9BUL8 212 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 PEMTQ9UBM1 199 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 OR51B2Q9Y5P1 312 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 DMRT1Q9Y5R6 373 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 SELENOKQ9Y6D0 94 aa12.35□□□□□ -0.43
SHKBP1-215ENST00000597649 FGF2P09038 288 aa12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 HOXB5P09067 269 aa12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 EWSR1Q01844 656 aaKnown RBP eCLIP12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 IZUMO4Q1ZYL8 232 aa12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 C10orf55Q5SWW7 151 aa12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 THOC7Q6I9Y2 204 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 OR1L8Q8NGR8 309 aa12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 MITD1Q8WV92 249 aa12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 GPR146Q96CH1 333 aa12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 WDR89Q96FK6 387 aaPredicted RBP12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 OVOL2Q9BRP0 275 aa12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 HINT2Q9BX68 163 aa12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 TMED3Q9Y3Q3 217 aa12.34□□□□□ -0.43
SHKBP1-215ENST00000597649 C15orf61A6NNL5 157 aa12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 TRAPPC2P0DI81 140 aa12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 TRAPPC2BP0DI82 140 aa12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 SULT1A3P0DMM9 295 aa12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 SULT1A4P0DMN0 295 aa12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 MYOD1P15172 320 aa12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 RHOGP84095 191 aa12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 GUCA2BQ16661 112 aa12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 C12orf45Q8N5I9 185 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 ZC4H2Q9NQZ6 224 aa12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 DNAH6Q9C0G6 4158 aa12.33□□□□□ -0.44
SHKBP1-215ENST00000597649 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 TRBV9A0A0B4J1U6 114 aa12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 A0A0G2JRQ6 117 aa12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 TEX50A0A1B0GTY4 177 aa12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 C2orf70A6NJV1 201 aa12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 IFNA17P01571 189 aa12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 P0C879 139 aa12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 FOLR2P14207 255 aa12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 EXOSC2Q13868 293 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 OR5B3Q8NH48 314 aa12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 QTRT1Q9BXR0 403 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 TMEM14BQ9NUH8 114 aa12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 CACNG5Q9UF02 275 aa12.32□□□□□ -0.44
SHKBP1-215ENST00000597649 A0A0B4J293 547 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 A0A1B0GU03 582 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 SNRPGP15A8MWD9 76 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 PPP5D1E7EU14 171 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 HSPE1P61604 102 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 ATP5G2Q06055 141 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 PMS2P11Q13670 270 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 SMCO1Q147U7 214 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 NMSQ5H8A3 153 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 GGNBP1Q5YKI7 109 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 OR1S1Q8NH92 325 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 DYNLRB2Q8TF09 96 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 CACFD1Q9UGQ2 172 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 ZNF257Q9Y2Q1 563 aa12.31□□□□□ -0.44
SHKBP1-215ENST00000597649 HMX3A6NHT5 357 aa12.3□□□□□ -0.44
SHKBP1-215ENST00000597649 ST8SIA3O43173 380 aa12.3□□□□□ -0.44
SHKBP1-215ENST00000597649 ADAP1O75689 374 aa12.3□□□□□ -0.44
SHKBP1-215ENST00000597649 Q6ZRM9 215 aa12.3□□□□□ -0.44
SHKBP1-215ENST00000597649 RPP25LQ8N5L8 163 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-215ENST00000597649 ENY2Q9NPA8 101 aa12.3□□□□□ -0.44
SHKBP1-215ENST00000597649 CXorf65A6NEN9 183 aa12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 DBX1A6NMT0 343 aa12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 FAM25EA8MYX2 175 aa12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 SSNA1O43805 119 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms