RNA–Protein interactions for RNA: ENST00000592266.1

RANBP3-227, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 589 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-227ENST00000592266 PINX1Q96BK5 328 aaKnown RBP12.79□□□□□ -0.36
RANBP3-227ENST00000592266 RNF2Q99496 336 aa12.79□□□□□ -0.36
RANBP3-227ENST00000592266 PDCD10Q9BUL8 212 aa12.79□□□□□ -0.36
RANBP3-227ENST00000592266 ALMS1Q8TCU4 4167 aa12.79□□□□□ -0.36
RANBP3-227ENST00000592266 TRAV14DV4A0A0A6YYC5 116 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 A0A0J9YWU9 116 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 CXorf65A6NEN9 183 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 NUPR2A6NF83 97 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 CHEK1O14757 476 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 SNCAP37840 140 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 PIGPP57054 158 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 PAFAH1B2P68402 229 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 LYG2Q86SG7 212 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 TMEM217Q8N7C4 229 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 SLC35G3Q8N808 338 aa12.78□□□□□ -0.36
RANBP3-227ENST00000592266 INS-IGF2F8WCM5 200 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 CORTO00230 105 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 ZNF182P17025 639 aaPredicted RBP12.77□□□□□ -0.37
RANBP3-227ENST00000592266 ATF4P18848 351 aaPredicted RBP12.77□□□□□ -0.37
RANBP3-227ENST00000592266 SUB1P53999 127 aaKnown RBP eCLIP12.77□□□□□ -0.37
RANBP3-227ENST00000592266 RNASE12Q5GAN4 147 aaKnown RBP12.77□□□□□ -0.37
RANBP3-227ENST00000592266 LHFPL1Q86WI0 220 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 CCDC71LQ8N9Z2 235 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 DUSP18Q8NEJ0 188 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 ZFAND1Q8TCF1 268 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 RNF183Q96D59 192 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 COPZ2Q9P299 210 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 EXTL2Q9UBQ6 330 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 KLK11Q9UBX7 282 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 MTFP1Q9UDX5 166 aa12.77□□□□□ -0.37
RANBP3-227ENST00000592266 BIRC6Q9NR09 4857 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 C3orf85A0A1B0GTC6 90 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 SCGB2A1O75556 95 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 B3GALNT1O75752 331 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 GABARAPO95166 117 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 IFNA17P01571 189 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 CD3DP04234 171 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 RPL35AP18077 110 aaKnown RBP12.76□□□□□ -0.37
RANBP3-227ENST00000592266 PMS2P11Q13670 270 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 TRIM16LQ309B1 348 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 OR52I2Q8NH67 350 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 MAP6D1Q9H9H5 199 aa12.76□□□□□ -0.37
RANBP3-227ENST00000592266 IGKV1-5P01602 117 aa12.75□□□□□ -0.37
RANBP3-227ENST00000592266 IGHV3-48P01763 117 aa12.75□□□□□ -0.37
RANBP3-227ENST00000592266 PI3P19957 117 aa12.75□□□□□ -0.37
RANBP3-227ENST00000592266 PPP5CP53041 499 aa12.75□□□□□ -0.37
RANBP3-227ENST00000592266 TAS2R19P59542 299 aa12.75□□□□□ -0.37
RANBP3-227ENST00000592266 ZNF600Q6ZNG1 722 aa12.75□□□□□ -0.37
RANBP3-227ENST00000592266 RRNAD1Q96FB5 475 aaKnown RBP12.75□□□□□ -0.37
RANBP3-227ENST00000592266 TP53RKQ96S44 253 aa12.75□□□□□ -0.37
RANBP3-227ENST00000592266 ENY2Q9NPA8 101 aa12.75□□□□□ -0.37
RANBP3-227ENST00000592266 IGHV3-49A0A0A0MS15 119 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 TFPI2P48307 235 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 HOXA1P49639 335 aaPredicted RBP12.74□□□□□ -0.37
RANBP3-227ENST00000592266 CTF1Q16619 201 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 IZUMO4Q1ZYL8 232 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 SPINK9Q5DT21 86 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 APRG1Q8IVJ8 170 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 TMEM229BQ8NBD8 167 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 TERB2Q8NHR7 220 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 RNASE11Q8TAA1 199 aaKnown RBP12.74□□□□□ -0.37
RANBP3-227ENST00000592266 ZNF414Q96IQ9 312 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 CSTL1Q9H114 145 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 TMEM231Q9H6L2 316 aa12.74□□□□□ -0.37
RANBP3-227ENST00000592266 IGKV3-7A0A075B6H7 116 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 A0A0B4J293 547 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 MPTX1A8MV57 137 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 ST8SIA3O43173 380 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 RAB3DO95716 219 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 CD74P04233 296 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 P0C879 139 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 MRPS10P82664 201 aaKnown RBP12.73□□□□□ -0.37
RANBP3-227ENST00000592266 SSBP1Q04837 148 aaKnown RBP12.73□□□□□ -0.37
RANBP3-227ENST00000592266 SCGB2B2Q4G0G5 96 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 FAM90A2PQ658T7 463 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 TOMM20LQ6UXN7 152 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 TCF24Q7RTU0 167 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 GATAD1Q8WUU5 269 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 LINC00476Q8WZB0 136 aa12.73□□□□□ -0.37
RANBP3-227ENST00000592266 KLK5Q9Y337 293 aaPredicted RBP12.73□□□□□ -0.37
RANBP3-227ENST00000592266 IGHV3OR16-13A0A075B7E8 117 aa12.72□□□□□ -0.37
RANBP3-227ENST00000592266 IGHV3-74A0A0B4J1X5 117 aa12.72□□□□□ -0.37
RANBP3-227ENST00000592266 UCP1P25874 307 aa12.72□□□□□ -0.37
RANBP3-227ENST00000592266 STEAP1BQ6NZ63 245 aa12.72□□□□□ -0.37
RANBP3-227ENST00000592266 CEMP1Q6PRD7 247 aaPredicted RBP12.72□□□□□ -0.37
RANBP3-227ENST00000592266 FAM219AQ8IW50 185 aa12.72□□□□□ -0.37
RANBP3-227ENST00000592266 ABHD1Q96SE0 405 aa12.72□□□□□ -0.37
RANBP3-227ENST00000592266 NAA50Q9GZZ1 169 aaKnown RBP12.72□□□□□ -0.37
RANBP3-227ENST00000592266 VSIRQ9H7M9 311 aa12.72□□□□□ -0.37
RANBP3-227ENST00000592266 PUS1Q9Y606 427 aaKnown RBP eCLIP12.72□□□□□ -0.37
RANBP3-227ENST00000592266 TRAV2A0A0B4J234 112 aa12.71□□□□□ -0.37
RANBP3-227ENST00000592266 A0A1W2PS18 150 aa12.71□□□□□ -0.37
RANBP3-227ENST00000592266 GABARAPH6UMI1 98 aa12.71□□□□□ -0.37
RANBP3-227ENST00000592266 DNASE2O00115 360 aaPredicted RBP12.71□□□□□ -0.37
RANBP3-227ENST00000592266 DFFBO76075 338 aa12.71□□□□□ -0.37
RANBP3-227ENST00000592266 TMEM50AO95807 157 aa12.71□□□□□ -0.37
RANBP3-227ENST00000592266 RNASE2P10153 161 aaKnown RBP12.71□□□□□ -0.37
RANBP3-227ENST00000592266 OPRK1P41145 380 aa12.71□□□□□ -0.37
RANBP3-227ENST00000592266 MEF2DQ14814 521 aa12.71□□□□□ -0.37
RANBP3-227ENST00000592266 SP6Q3SY56 376 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms