RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 C21orf62Q9NYP8 219 aa7.51□□□□□ -1.21
RPA1-206ENST00000573994 CCDC59Q9P031 241 aaKnown RBP7.51□□□□□ -1.21
RPA1-206ENST00000573994 C3orf84H3BNL1 204 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 ZNF207O43670 478 aaKnown RBP7.5□□□□□ -1.21
RPA1-206ENST00000573994 NOL3O60936 208 aaKnown RBP7.5□□□□□ -1.21
RPA1-206ENST00000573994 IGHV3-48P01763 117 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 CD74P04233 296 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 AKR1C2P52895 323 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 PRCDQ00LT1 54 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 IL18Q14116 193 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 MEF2DQ14814 521 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 ANKRD55Q3KP44 614 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 SP6Q3SY56 376 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 STEAP1BQ6NZ63 245 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 OR2C3Q8N628 320 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 MUC7Q8TAX7 377 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 MARCH1Q8TCQ1 289 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 DYNC2LI1Q8TCX1 351 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 SCARB1Q8WTV0 552 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 BSCL2Q96G97 398 aaPredicted RBP7.5□□□□□ -1.21
RPA1-206ENST00000573994 FAM110AQ9BQ89 295 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 SPATA25Q9BR10 227 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 C20orf24Q9BUV8 137 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 ZNF436Q9C0F3 470 aaPredicted RBP7.5□□□□□ -1.21
RPA1-206ENST00000573994 C6orf62Q9GZU0 229 aaPredicted RBP7.5□□□□□ -1.21
RPA1-206ENST00000573994 COPZ2Q9P299 210 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 UFC1Q9Y3C8 167 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 CEPT1Q9Y6K0 416 aa7.5□□□□□ -1.21
RPA1-206ENST00000573994 CSMD3Q7Z407 3707 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 TRAV25A0A0B4J276 109 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 C3orf85A0A1B0GTC6 90 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 RBMY1BA6NDE4 496 aaKnown RBP7.49□□□□□ -1.21
RPA1-206ENST00000573994 RBMY1EA6NEQ0 496 aaKnown RBP7.49□□□□□ -1.21
RPA1-206ENST00000573994 OR11H12B2RN74 326 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 H3BMQ9 156 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 CTDSPLO15194 276 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 RBMY1DP0C7P1 496 aaKnown RBP7.49□□□□□ -1.21
RPA1-206ENST00000573994 RPL5P46777 297 aaKnown RBP7.49□□□□□ -1.21
RPA1-206ENST00000573994 HSPE1P61604 102 aaKnown RBP7.49□□□□□ -1.21
RPA1-206ENST00000573994 SURF2Q15527 256 aaPredicted RBP7.49□□□□□ -1.21
RPA1-206ENST00000573994 ZFAND6Q6FIF0 208 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 SLC35G3Q8N808 338 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 CCDC71LQ8N9Z2 235 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 OR52B4Q8NGK2 314 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 OR4C16Q8NGL9 310 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 OR1P1Q8NH06 330 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 RNASE11Q8TAA1 199 aaKnown RBP7.49□□□□□ -1.21
RPA1-206ENST00000573994 SMIM4Q8WVI0 70 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 PINX1Q96BK5 328 aaKnown RBP7.49□□□□□ -1.21
RPA1-206ENST00000573994 ISOC1Q96CN7 298 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 DIRAS2Q96HU8 199 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 TXN2Q99757 166 aa7.49□□□□□ -1.21
RPA1-206ENST00000573994 MRPL27Q9P0M9 148 aaKnown RBP7.49□□□□□ -1.21
RPA1-206ENST00000573994 A0A0B4J293 547 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 A0A0G2JRQ6 117 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 INS-IGF2F8WCM5 200 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 I3L2K1 104 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 ST8SIA3O43173 380 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 MT-CO2P00403 227 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 CTSDP07339 412 aaPredicted RBP7.48□□□□□ -1.21
RPA1-206ENST00000573994 P0C879 139 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 C8orf88P0DMB2 117 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 FCGR2BP31994 310 aaPredicted RBP7.48□□□□□ -1.21
RPA1-206ENST00000573994 HOXA1P49639 335 aaPredicted RBP7.48□□□□□ -1.21
RPA1-206ENST00000573994 ERHP84090 104 aaKnown RBP7.48□□□□□ -1.21
RPA1-206ENST00000573994 RBPMS2Q6ZRY4 209 aaKnown RBP7.48□□□□□ -1.21
RPA1-206ENST00000573994 SLC16A13Q7RTY0 426 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 ZNF114Q8NC26 417 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 DAZ1Q9NQZ3 744 aaKnown RBP7.48□□□□□ -1.21
RPA1-206ENST00000573994 CACFD1Q9UGQ2 172 aa7.48□□□□□ -1.21
RPA1-206ENST00000573994 RSL24D1Q9UHA3 163 aaKnown RBP7.48□□□□□ -1.21
RPA1-206ENST00000573994 PLECQ15149 4684 aaKnown RBP7.48□□□□□ -1.21
RPA1-206ENST00000573994 IGHV3-49A0A0A0MS15 119 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 DISC1C4P0D8 188 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 K7EMT4 169 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 NDUFA4O00483 81 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 YIF1AO95070 293 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 IFNA17P01571 189 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 OR5AC1P0C628 307 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 LYL1P12980 280 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 UCP1P25874 307 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 RELQ04864 619 aaPredicted RBP7.47□□□□□ -1.21
RPA1-206ENST00000573994 CASC10Q5T4H9 136 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 LINC00322Q6ZN03 302 aaPredicted RBP7.47□□□□□ -1.21
RPA1-206ENST00000573994 FAM219AQ8IW50 185 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 LHFPL5Q8TAF8 219 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 RRNAD1Q96FB5 475 aaKnown RBP7.47□□□□□ -1.21
RPA1-206ENST00000573994 ZNF414Q96IQ9 312 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 SCGB3A2Q96PL1 93 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 SLIRPQ9GZT3 109 aaKnown RBP7.47□□□□□ -1.21
RPA1-206ENST00000573994 HIPK2Q9H2X6 1198 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 C5orf66Q9H5L9 145 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 NAA60Q9H7X0 242 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 UBQLN2Q9UHD9 624 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 C14orf166Q9Y224 244 aaKnown RBP7.47□□□□□ -1.21
RPA1-206ENST00000573994 LYSTQ99698 3801 aa7.47□□□□□ -1.21
RPA1-206ENST00000573994 DNAH1Q9P2D7 4330 aa7.46□□□□□ -1.22
RPA1-206ENST00000573994 PIGBOS1A0A0B4J2F0 54 aa7.46□□□□□ -1.22
RPA1-206ENST00000573994 TEX13DA0A0J9YY54 714 aaPredicted RBP7.46□□□□□ -1.22
RPA1-206ENST00000573994 CORTO00230 105 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms