RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 WNT10AQ9GZT5 417 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 SLC35D1Q9NTN3 355 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 ISLRO14498 428 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 LHBP01229 141 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 CT45A6P0DMU7 189 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 CT45A5P0DMU8 189 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 CT45A7P0DMV0 189 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 MMDQ15546 238 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 OR4B1Q8NGF8 309 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 CCL13Q99616 98 aa14.24□□□□□ -0.13
SCARF1-205ENST00000571272 NAV3Q8IVL0 2385 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 AMY1AP04745 511 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 OR5G3P0C626 314 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 TAS2R45P59539 299 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 OR10J3Q5JRS4 329 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 C1orf174Q8IYL3 243 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.23□□□□□ -0.13
SCARF1-205ENST00000571272 OR2T6Q8NHC8 308 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 SARAFQ96BY9 339 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 SLC25A33Q9BSK2 321 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 ARL2-SNX15V9GYD0 113 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 PPOXP50336 477 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 KLF3P57682 345 aaPredicted RBP14.23□□□□□ -0.13
SCARF1-205ENST00000571272 ATOH7Q8N100 152 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 FAM216BQ8N7L0 139 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 ADTRPQ96IZ2 230 aa14.23□□□□□ -0.13
SCARF1-205ENST00000571272 ITGB1BP1O14713 200 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 ZNF324O75467 553 aaPredicted RBP14.22□□□□□ -0.13
SCARF1-205ENST00000571272 IGHV3-48P01763 117 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 C8orf88P0DMB2 117 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 MRPL52Q86TS9 123 aaKnown RBP14.22□□□□□ -0.13
SCARF1-205ENST00000571272 ZNF439Q8NDP4 499 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 IGF2BP2-AS1Q96M15 143 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 GUCD1Q96NT3 240 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 DKK4Q9UBT3 224 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 FNDC10F2Z333 226 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 C3orf79P0CE67 100 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 SAA1P0DJI8 122 aaPredicted RBP14.22□□□□□ -0.13
SCARF1-205ENST00000571272 USF1P22415 310 aaPredicted RBP14.22□□□□□ -0.13
SCARF1-205ENST00000571272 UBE2L3P68036 154 aaKnown RBP14.22□□□□□ -0.13
SCARF1-205ENST00000571272 SLAQ13239 276 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 SLC35E1Q96K37 410 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 TANC2Q9HCD6 1990 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 LAMA5O15230 3695 aa14.22□□□□□ -0.13
SCARF1-205ENST00000571272 PLXNB1O43157 2135 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 SMIM27A0A1W2PRY6 76 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 HLA-DQA1P01909 254 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 APCSP02743 223 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 RNASE2P10153 161 aaKnown RBP14.21□□□□□ -0.13
SCARF1-205ENST00000571272 POU2AF1Q16633 256 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 PRR31Q5SQ13 230 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 NIT1Q86X76 327 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 TRAV34A0A0B4J273 112 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 PYYP10082 97 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 CTRLP40313 264 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 SSBP2P81877 361 aaPredicted RBP14.21□□□□□ -0.13
SCARF1-205ENST00000571272 RTL8BQ17RB0 113 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 TSKUQ8WUA8 353 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 ZNF331Q9NQX6 463 aaPredicted RBP14.21□□□□□ -0.13
SCARF1-205ENST00000571272 ZNF355PQ9NSJ1 428 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 DCAF16Q9NXF7 216 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 ZNF257Q9Y2Q1 563 aa14.21□□□□□ -0.13
SCARF1-205ENST00000571272 A0A1W2PRE2 83 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 COLQQ9Y215 455 aaPredicted RBP14.2□□□□□ -0.14
SCARF1-205ENST00000571272 C2orf83Q53S99 150 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 TXN2Q99757 166 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 SLC25A2Q9BXI2 301 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 CNOT1A5YKK6 2376 aaKnown RBP14.2□□□□□ -0.14
SCARF1-205ENST00000571272 EP300Q09472 2414 aaPredicted RBP14.2□□□□□ -0.14
SCARF1-205ENST00000571272 DPRXA6NFQ7 191 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 BTF3P20290 206 aaKnown RBP14.2□□□□□ -0.14
SCARF1-205ENST00000571272 CD69Q07108 199 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 LCN12Q6JVE5 192 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 PRR27Q6MZM9 219 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 FAM167A-AS1Q96KT0 104 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 RAB9BQ9NP90 201 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 RNF7Q9UBF6 113 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 BDP1A6H8Y1 2624 aa14.2□□□□□ -0.14
SCARF1-205ENST00000571272 E7EUB6 86 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 SP9P0CG40 484 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 WT1P19544 449 aaPredicted RBP14.19□□□□□ -0.14
SCARF1-205ENST00000571272 MAJINQ3KP22 176 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 SEM1Q6ZVN7 128 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 DCHS1Q96JQ0 3298 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 IZUMO1RA6ND01 250 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 CHRNB4P30926 498 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 REG1BP48304 166 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 MFAP2P55001 183 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 COX19Q49B96 90 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 COL5A1-AS1Q5SY13 56 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 Q6ZN92 141 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 GAFA1Q96PS6 74 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 ABCA1O95477 2261 aa14.19□□□□□ -0.14
SCARF1-205ENST00000571272 HYPMO75409 117 aa14.18□□□□□ -0.14
SCARF1-205ENST00000571272 PRRX1P54821 245 aa14.18□□□□□ -0.14
SCARF1-205ENST00000571272 GAGE1Q13065 139 aa14.18□□□□□ -0.14
SCARF1-205ENST00000571272 BORCS7Q96B45 105 aa14.18□□□□□ -0.14
SCARF1-205ENST00000571272 DNAJC4Q9NNZ3 241 aa14.18□□□□□ -0.14
SCARF1-205ENST00000571272 AMMECR1Q9Y4X0 333 aaPredicted RBP14.18□□□□□ -0.14
SCARF1-205ENST00000571272 GLRXP35754 106 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms