RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 PPP5D1E7EU14 171 aa10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 K7EIM0 57 aa10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 GGCTO75223 188 aaKnown RBP10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 HLA-AP01891 365 aaKnown RBP10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 HOXA1P49639 335 aaPredicted RBP10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 DCTN2Q13561 401 aaKnown RBP10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 SMCO1Q147U7 214 aa10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 LYG2Q86SG7 212 aa10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 ZNF502Q8TBZ5 544 aa10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 VN1R17PQ8TDU5 208 aa10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 PRR25Q96S07 402 aa10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 ENY2Q9NPA8 101 aa10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 IGHV3-21A0A0B4J1V1 117 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 A0A1B0GU03 582 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 NXPH3O95157 252 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 CLEC3BP05452 202 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 RNASE2P10153 161 aaKnown RBP10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 ARL3P36405 182 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 SNCAP37840 140 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 DHRS2Q13268 280 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 C4orf46Q504U0 113 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 MZT2BQ6NZ67 158 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 SCARB1Q8WTV0 552 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 PEMTQ9UBM1 199 aa10.55□□□□□ -0.72
HERPUD1-210ENST00000565966 FAM240BA0A1B0GVZ2 78 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 I3L2K1 104 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 PITX3O75364 302 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 LY86O95711 162 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 IGLV1-51P01701 117 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 HOXB5P09067 269 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 SPNP16150 400 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 BSXQ3C1V8 233 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 GGNBP1Q5YKI7 109 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 PVRIGQ6DKI7 326 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 IL34Q6ZMJ4 242 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 GPHB5Q86YW7 130 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 OR1S1Q8NH92 325 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 NUDT15Q9NV35 164 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 C21orf62Q9NYP8 219 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 SIGLEC8Q9NYZ4 499 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 HSPB7Q9UBY9 170 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 CACFD1Q9UGQ2 172 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 TMED3Q9Y3Q3 217 aa10.54□□□□□ -0.72
HERPUD1-210ENST00000565966 TRAV6A0A075B6T7 132 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 CEBPZOSA8MTT3 80 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 F8W735 103 aaPredicted RBP10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 ADAP1O75689 374 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 OR2C1O95371 312 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 MT-CO2P00403 227 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 CSN3P07498 182 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 SLC25A6P12236 298 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 GPR183P32249 361 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 TNFRSF9Q07011 255 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 C11orf87Q6NUJ2 197 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 OR52B4Q8NGK2 314 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 COQ8AQ8NI60 647 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 ATP6V0BQ99437 205 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 HEYLQ9NQ87 328 aaPredicted RBP10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 ZC4H2Q9NQZ6 224 aa10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 LSM4Q9Y4Z0 139 aaKnown RBP10.53□□□□□ -0.72
HERPUD1-210ENST00000565966 LGALS9O00182 355 aa10.52□□□□□ -0.73
HERPUD1-210ENST00000565966 H2AFB2P0C5Z0 115 aa10.52□□□□□ -0.73
HERPUD1-210ENST00000565966 GP9P14770 177 aa10.52□□□□□ -0.73
HERPUD1-210ENST00000565966 SUB1P53999 127 aaKnown RBP eCLIP10.52□□□□□ -0.73
HERPUD1-210ENST00000565966 FAM106AQ4KMX7 169 aa10.52□□□□□ -0.73
HERPUD1-210ENST00000565966 MITD1Q8WV92 249 aa10.52□□□□□ -0.73
HERPUD1-210ENST00000565966 PINX1Q96BK5 328 aaKnown RBP10.52□□□□□ -0.73
HERPUD1-210ENST00000565966 RBKSQ9H477 322 aa10.52□□□□□ -0.73
HERPUD1-210ENST00000565966 OR2T8A6NH00 312 aa10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 TGOLN2O43493 480 aa10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 IGHV3-48P01763 117 aa10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 HTR2BP41595 481 aa10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 C2orf83Q53S99 150 aa10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 PLET1Q6UQ28 207 aa10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 HAPLN4Q86UW8 402 aa10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 DTD1Q8TEA8 209 aa10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 BSCL2Q96G97 398 aaPredicted RBP10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 SEC22CQ9BRL7 303 aa10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 HIPK2Q9H2X6 1198 aa10.51□□□□□ -0.73
HERPUD1-210ENST00000565966 IGHV3-35A0A0C4DH35 117 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 MPTX1A8MV57 137 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 FAM90A26D6RGX4 464 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 CORTO00230 105 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 FCGR2BP31994 310 aaPredicted RBP10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 MFAP4P55083 255 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 Q56UQ5 140 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 SPSB3Q6PJ21 355 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 UBAC2Q8NBM4 344 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 SLC24A4Q8NFF2 622 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 ENKURQ8TC29 256 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 TMEM170AQ8WVE7 144 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 TXN2Q99757 166 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 B9D2Q9BPU9 175 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 CHRDL1Q9BU40 450 aa10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 FNDC4Q9H6D8 234 aaPredicted RBP10.5□□□□□ -0.73
HERPUD1-210ENST00000565966 ZNF320A2RRD8 509 aa10.49□□□□□ -0.73
HERPUD1-210ENST00000565966 C2orf70A6NJV1 201 aa10.49□□□□□ -0.73
HERPUD1-210ENST00000565966 IFNA21P01568 189 aa10.49□□□□□ -0.73
HERPUD1-210ENST00000565966 CTSGP08311 255 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms