RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 FFAR4Q5NUL3 377 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 MALSU1Q96EH3 234 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 PBDC1Q9BVG4 233 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 KIAA1456Q9P272 454 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 SVEP1Q4LDE5 3571 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 SPTAN1Q13813 2472 aaKnown RBP7.57□□□□□ -1.2
LINC00838-201ENST00000562956 A0A1W2PPI3 338 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 A0A1W2PRD5 423 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 A0A1W2PRF3 423 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 A0A1W2PRM7 423 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 RBFOX3A6NFN3 312 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 MBP02144 154 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 ZNF25P17030 456 aaPredicted RBP7.57□□□□□ -1.2
LINC00838-201ENST00000562956 LGALS7P47929 136 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 CLEC12BQ2HXU8 276 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 VMA21Q3ZAQ7 101 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 LHFPL4Q7Z7J7 247 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 ZNF709Q8N972 641 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 OR1L8Q8NGR8 309 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 MBD3L1Q8WWY6 194 aa7.57□□□□□ -1.2
LINC00838-201ENST00000562956 VPS13CQ709C8 3753 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 ZNF462Q96JM2 2506 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 HBE1P02100 147 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 HTR1DP28221 377 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 LMO4P61968 165 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 PAX2Q02962 417 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 BSXQ3C1V8 233 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 TPTE2P1Q5T6R2 138 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 VMO1Q7Z5L0 202 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 ZNF664Q8N3J9 261 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 CLDND2Q8NHS1 167 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 CCL19Q99731 98 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 MGST2Q99735 147 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 HILPDAQ9Y5L2 63 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 ODF3BA8MYP8 253 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 C17orf112F2Z3M2 114 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 TIMM23O14925 209 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 RNASE2P10153 161 aaKnown RBP7.56□□□□□ -1.2
LINC00838-201ENST00000562956 DEFA4P12838 97 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 WT1-ASQ06250 92 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 ZNF787Q6DD87 383 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 OR10G4Q8NGN3 311 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 OR10G9Q8NGN4 311 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 OR10G7Q8NGN6 311 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 ABHD5Q8WTS1 349 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 C2orf88Q9BSF0 95 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 ARHGAP32A7KAX9 2087 aa7.56□□□□□ -1.2
LINC00838-201ENST00000562956 UTP20O75691 2785 aaKnown RBP7.55□□□□□ -1.2
LINC00838-201ENST00000562956 HMGB3O15347 200 aaKnown RBP7.55□□□□□ -1.2
LINC00838-201ENST00000562956 CRYGBP07316 175 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 NUTF2P61970 127 aaKnown RBP7.55□□□□□ -1.2
LINC00838-201ENST00000562956 PSG5Q15238 335 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 C2orf83Q53S99 150 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 GCSAMLQ5JQS6 135 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 C1orf122Q6ZSJ8 110 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 HIST1H2BLQ99880 126 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 SLC25A22Q9H936 323 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 GNG13Q9P2W3 67 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 DPM3Q9P2X0 92 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 LSM4Q9Y4Z0 139 aaKnown RBP7.55□□□□□ -1.2
LINC00838-201ENST00000562956 MAP1LC3B2A6NCE7 125 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 GOSR1O95249 250 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 ICAM4Q14773 271 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 MLANAQ16655 118 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 C1QL4Q86Z23 238 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 KIR3DL3Q8N743 410 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 CYB561D1Q8N8Q1 229 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 TEX45Q8NA69 505 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 SPOCK3Q9BQ16 436 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 GGTLC1Q9BX51 225 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 MAP1LC3BQ9GZQ8 125 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 NPVFQ9HCQ7 196 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 SLC39A9Q9NUM3 307 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 AKAP6Q13023 2319 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 TNCP24821 2201 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 MPDU1O75352 247 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 HOXB4P17483 251 aaPredicted RBP7.55□□□□□ -1.2
LINC00838-201ENST00000562956 SRSF1Q07955 248 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC00838-201ENST00000562956 PRSS8Q16651 343 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 YPEL4Q96NS1 127 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 SIGLEC9Q9Y336 463 aa7.55□□□□□ -1.2
LINC00838-201ENST00000562956 MYO18BQ8IUG5 2567 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 EPG5Q9HCE0 2579 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 IGHV2-70DA0A0C4DH43 119 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 A0A1W2PN81 502 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 A8MWP6 167 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 INS-IGF2F8WCM5 200 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 VENTXO95231 258 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 CHRNA7P36544 502 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 OPRK1P41145 380 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 ERHP84090 104 aaKnown RBP7.54□□□□□ -1.2
LINC00838-201ENST00000562956 ZNF506Q5JVG8 444 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 MIC13Q5XKP0 118 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 SSMEM1Q8WWF3 244 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 SIRPDQ9H106 197 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 ZFP92A6NM28 416 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 REG1AP05451 166 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 CD24P25063 80 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 PDLIM4P50479 330 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 TNXAQ16473 311 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms