RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CRIPAKQ8N1N5 446 aa7.71□□□□□ -1.18
CDH1-205ENST00000562836 LINC01465Q8N7H1 131 aa7.71□□□□□ -1.18
CDH1-205ENST00000562836 C9orf85Q96MD7 179 aa7.71□□□□□ -1.18
CDH1-205ENST00000562836 DOCK11Q5JSL3 2073 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 PCNTO95613 3336 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 RALGAPA2Q2PPJ7 1873 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 SMIM28A0A1B0GU29 152 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 LDB3O75112 727 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 SPRNQ5BIV9 151 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 WFDC6Q9BQY6 131 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 C1QTNF5Q9BXJ0 243 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 IFI27L2Q9H2X8 130 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 FAM90A10PA6NDY2 464 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 NPIPB6E9PJ23 425 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 EFNA2O43921 213 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 NAPSAO96009 420 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 COX7A2P14406 83 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 LMO2P25791 158 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 HOXD9P28356 352 aaPredicted RBP7.7□□□□□ -1.18
CDH1-205ENST00000562836 OPRK1P41145 380 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 C9orf57Q5W0N0 161 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 ZAR1Q86SH2 424 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 FBXL14Q8N1E6 418 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 RFLNBQ8N5W9 214 aa7.7□□□□□ -1.18
CDH1-205ENST00000562836 COL4A5P29400 1685 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 IL9P15248 144 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 ARL16Q0P5N6 197 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 TMEM52BQ4KMG9 183 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 PCSK4Q6UW60 755 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 WFDC11Q8NEX6 87 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 ZMAT4Q9H898 229 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 HEYLQ9NQ87 328 aaPredicted RBP7.69□□□□□ -1.18
CDH1-205ENST00000562836 GNG12Q9UBI6 72 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 TMED7-TICAM2A0A0A6YYA0 188 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 A1L4Q6 167 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 LINC01548A6NM66 108 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 A8MWL6 223 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 NTN1O95631 604 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 MGST1P10620 155 aaKnown RBP7.69□□□□□ -1.18
CDH1-205ENST00000562836 RFLNAQ6ZTI6 216 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 Q8NA96 180 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 LINC00479Q96M42 142 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 DSCR8Q96T75 97 aa7.69□□□□□ -1.18
CDH1-205ENST00000562836 LSM7Q9UK45 103 aaKnown RBP7.69□□□□□ -1.18
CDH1-205ENST00000562836 CHCHD2Q9Y6H1 151 aaPredicted RBP7.69□□□□□ -1.18
CDH1-205ENST00000562836 FRG2CA6NGY1 282 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 SLC25A14O95258 325 aaPredicted RBP7.68□□□□□ -1.18
CDH1-205ENST00000562836 GCSHP23434 173 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 SMIM11AP58511 58 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 TEX36Q5VZQ5 186 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 LINC01561Q8N1V8 128 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 IGFBPL1Q8WX77 278 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 FAM19A4Q96LR4 140 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 KCNIP2Q9NS61 270 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 C1orf226A1L170 272 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 IGLL5B9A064 214 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 H3BS24 57 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 ZNF441Q8N8Z8 693 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 NUS1Q96E22 293 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 DEFB118Q96PH6 123 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 PLA2G2FQ9BZM2 168 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 PHPT1Q9NRX4 125 aaPredicted RBP7.68□□□□□ -1.18
CDH1-205ENST00000562836 DEPPQ9NTK1 212 aa7.68□□□□□ -1.18
CDH1-205ENST00000562836 TRAV8-1A0A0A6YYK1 113 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 LOC107986453A0A1B0GWG9 222 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 PRSS46E5RG02 174 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 SPINK4O60575 86 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 DHRS3O75911 302 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 NDUFB2O95178 105 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 FKBP2P26885 142 aaKnown RBP7.67□□□□□ -1.18
CDH1-205ENST00000562836 DSCR4P56555 118 aaPredicted RBP7.67□□□□□ -1.18
CDH1-205ENST00000562836 EFEMP1Q12805 493 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 IGFL2Q6UWQ7 119 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 LINC00173Q6ZV60 143 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 ZNF236Q9UL36 1845 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 H3BSH0 61 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 RRHO14718 337 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 SPINT2O43291 252 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 LMX1BO60663 402 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 FGF6P10767 208 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 FXYD2P54710 66 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 FKBP1BP68106 108 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 TRIP6Q15654 476 aaKnown RBP7.67□□□□□ -1.18
CDH1-205ENST00000562836 TRAPPC6BQ86SZ2 158 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 C11orf45Q8TAV5 145 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 MRPL24Q96A35 216 aaKnown RBP7.67□□□□□ -1.18
CDH1-205ENST00000562836 BPIFA1Q9NP55 256 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 TNFRSF19Q9NS68 423 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 SIT1Q9Y3P8 196 aa7.67□□□□□ -1.18
CDH1-205ENST00000562836 TRBV9A0A0B4J1U6 114 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 K7ENP7 123 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 CXCL13O43927 109 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 CD7P09564 240 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 FOXA3P55318 350 aaPredicted RBP7.66□□□□□ -1.18
CDH1-205ENST00000562836 NXPH1P58417 271 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 PMVKQ15126 192 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 CFAP126Q5VTH2 177 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 HLA-DQA1Q5Y7H0 255 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 OR4C11Q6IEV9 310 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 PHLDA1Q8WV24 401 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms