RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 PINX1Q96BK5 328 aaKnown RBP12.78□□□□□ -0.36
CRTC3-208ENST00000560098 DNAH10Q8IVF4 4471 aa12.77□□□□□ -0.37
CRTC3-208ENST00000560098 CD5P06127 495 aa12.77□□□□□ -0.37
CRTC3-208ENST00000560098 HSPE1P61604 102 aaKnown RBP12.77□□□□□ -0.37
CRTC3-208ENST00000560098 LSM3P62310 102 aaKnown RBP12.77□□□□□ -0.37
CRTC3-208ENST00000560098 ERHP84090 104 aaKnown RBP12.77□□□□□ -0.37
CRTC3-208ENST00000560098 TCF24Q7RTU0 167 aa12.77□□□□□ -0.37
CRTC3-208ENST00000560098 MRGPRFQ96AM1 343 aa12.77□□□□□ -0.37
CRTC3-208ENST00000560098 GINS3Q9BRX5 216 aa12.77□□□□□ -0.37
CRTC3-208ENST00000560098 DEDDO75618 318 aa12.76□□□□□ -0.37
CRTC3-208ENST00000560098 EIF4EP06730 217 aaKnown RBP12.76□□□□□ -0.37
CRTC3-208ENST00000560098 UCP3P55916 312 aa12.76□□□□□ -0.37
CRTC3-208ENST00000560098 TOMM20LQ6UXN7 152 aa12.76□□□□□ -0.37
CRTC3-208ENST00000560098 OR11H2Q8NH07 326 aa12.76□□□□□ -0.37
CRTC3-208ENST00000560098 C11orf45Q8TAV5 145 aa12.76□□□□□ -0.37
CRTC3-208ENST00000560098 MFFQ9GZY8 342 aa12.76□□□□□ -0.37
CRTC3-208ENST00000560098 C11orf68Q9H3H3 251 aaKnown RBP12.76□□□□□ -0.37
CRTC3-208ENST00000560098 NANOS2P60321 138 aaKnown RBP12.75□□□□□ -0.37
CRTC3-208ENST00000560098 ST8SIA2Q92186 375 aa12.75□□□□□ -0.37
CRTC3-208ENST00000560098 YIPF6Q96EC8 236 aa12.75□□□□□ -0.37
CRTC3-208ENST00000560098 VSIRQ9H7M9 311 aa12.75□□□□□ -0.37
CRTC3-208ENST00000560098 SCPEP1Q9HB40 452 aa12.75□□□□□ -0.37
CRTC3-208ENST00000560098 SMIM31A0A1B0GVY4 71 aa12.74□□□□□ -0.37
CRTC3-208ENST00000560098 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
CRTC3-208ENST00000560098 APOHP02749 345 aaPredicted RBP12.74□□□□□ -0.37
CRTC3-208ENST00000560098 IFNA4P05014 189 aa12.74□□□□□ -0.37
CRTC3-208ENST00000560098 NPBWR1P48145 328 aa12.74□□□□□ -0.37
CRTC3-208ENST00000560098 RBMS2Q15434 407 aaKnown RBP12.74□□□□□ -0.37
CRTC3-208ENST00000560098 DUSP18Q8NEJ0 188 aa12.74□□□□□ -0.37
CRTC3-208ENST00000560098 MS4A6AQ9H2W1 248 aa12.74□□□□□ -0.37
CRTC3-208ENST00000560098 COMMD3Q9UBI1 195 aa12.74□□□□□ -0.37
CRTC3-208ENST00000560098 FBXL17Q9UF56 701 aa12.74□□□□□ -0.37
CRTC3-208ENST00000560098 DNASE2O00115 360 aaPredicted RBP12.73□□□□□ -0.37
CRTC3-208ENST00000560098 DFFBO76075 338 aa12.73□□□□□ -0.37
CRTC3-208ENST00000560098 CA1P00915 261 aaPredicted RBP12.73□□□□□ -0.37
CRTC3-208ENST00000560098 APOA1P02647 267 aa12.73□□□□□ -0.37
CRTC3-208ENST00000560098 RCVRNP35243 200 aa12.73□□□□□ -0.37
CRTC3-208ENST00000560098 SPINK9Q5DT21 86 aa12.73□□□□□ -0.37
CRTC3-208ENST00000560098 ZNF600Q6ZNG1 722 aa12.73□□□□□ -0.37
CRTC3-208ENST00000560098 SNX29P2Q8IUI4 249 aa12.73□□□□□ -0.37
CRTC3-208ENST00000560098 LILRB2Q8N423 598 aa12.73□□□□□ -0.37
CRTC3-208ENST00000560098 SNCAP37840 140 aa12.72□□□□□ -0.37
CRTC3-208ENST00000560098 DEFB131AP59861 70 aa12.72□□□□□ -0.37
CRTC3-208ENST00000560098 RPL11P62913 178 aaKnown RBP12.72□□□□□ -0.37
CRTC3-208ENST00000560098 TMEM187Q14656 261 aa12.72□□□□□ -0.37
CRTC3-208ENST00000560098 IZUMO4Q1ZYL8 232 aa12.72□□□□□ -0.37
CRTC3-208ENST00000560098 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
CRTC3-208ENST00000560098 PUS1Q9Y606 427 aaKnown RBP eCLIP12.72□□□□□ -0.37
CRTC3-208ENST00000560098 VPS13DQ5THJ4 4388 aa12.71□□□□□ -0.37
CRTC3-208ENST00000560098 TRAV2A0A0B4J234 112 aa12.71□□□□□ -0.37
CRTC3-208ENST00000560098 IGHV3-66A0A0C4DH42 116 aa12.71□□□□□ -0.37
CRTC3-208ENST00000560098 LEMD1Q68G75 181 aa12.71□□□□□ -0.37
CRTC3-208ENST00000560098 VCX3AQ9NNX9 186 aa12.71□□□□□ -0.37
CRTC3-208ENST00000560098 INS-IGF2F8WCM5 200 aa12.71□□□□□ -0.38
CRTC3-208ENST00000560098 M0QYG6 137 aa12.71□□□□□ -0.38
CRTC3-208ENST00000560098 DEFB4AO15263 64 aa12.71□□□□□ -0.38
CRTC3-208ENST00000560098 TMEM50AO95807 157 aa12.71□□□□□ -0.38
CRTC3-208ENST00000560098 IGKV1-5P01602 117 aa12.71□□□□□ -0.38
CRTC3-208ENST00000560098 RND3P61587 244 aa12.71□□□□□ -0.38
CRTC3-208ENST00000560098 FAM24BQ8N5W8 94 aa12.71□□□□□ -0.38
CRTC3-208ENST00000560098 SLC35G3Q8N808 338 aa12.71□□□□□ -0.38
CRTC3-208ENST00000560098 C2CD4CQ8TF44 421 aa12.71□□□□□ -0.38
CRTC3-208ENST00000560098 TMEM231Q9H6L2 316 aa12.71□□□□□ -0.38
CRTC3-208ENST00000560098 A0A087WXM4 84 aa12.7□□□□□ -0.38
CRTC3-208ENST00000560098 A0A0B4J293 547 aa12.7□□□□□ -0.38
CRTC3-208ENST00000560098 A0A1B0GU03 582 aa12.7□□□□□ -0.38
CRTC3-208ENST00000560098 IFNA17P01571 189 aa12.7□□□□□ -0.38
CRTC3-208ENST00000560098 PGAM2P15259 253 aa12.7□□□□□ -0.38
CRTC3-208ENST00000560098 ELK1P19419 428 aa12.7□□□□□ -0.38
CRTC3-208ENST00000560098 AKR1C2P52895 323 aa12.7□□□□□ -0.38
CRTC3-208ENST00000560098 PVRIGQ6DKI7 326 aa12.7□□□□□ -0.38
CRTC3-208ENST00000560098 STHQ8IWL8 128 aa12.7□□□□□ -0.38
CRTC3-208ENST00000560098 ZNF486Q96H40 463 aaPredicted RBP12.7□□□□□ -0.38
CRTC3-208ENST00000560098 HECTD4Q9Y4D8 3996 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 CORTO00230 105 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 P0C879 139 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 PI3P19957 117 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 NPPCP23582 126 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 SUB1P53999 127 aaKnown RBP eCLIP12.69□□□□□ -0.38
CRTC3-208ENST00000560098 PIGPP57054 158 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 TCTAP57738 103 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 NCS1P62166 190 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 TP53RKQ96S44 253 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 PDCD10Q9BUL8 212 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 RABAC1Q9UI14 185 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 HERC2O95714 4834 aa12.69□□□□□ -0.38
CRTC3-208ENST00000560098 A0A1W2PS18 150 aa12.68□□□□□ -0.38
CRTC3-208ENST00000560098 HPGDSO60760 199 aa12.68□□□□□ -0.38
CRTC3-208ENST00000560098 ATG12O94817 140 aa12.68□□□□□ -0.38
CRTC3-208ENST00000560098 RNASE2P10153 161 aaKnown RBP12.68□□□□□ -0.38
CRTC3-208ENST00000560098 LHFPL1Q86WI0 220 aa12.68□□□□□ -0.38
CRTC3-208ENST00000560098 KRTAP17-1Q9BYP8 105 aa12.68□□□□□ -0.38
CRTC3-208ENST00000560098 ETV6P41212 452 aa12.67□□□□□ -0.38
CRTC3-208ENST00000560098 HOXA1P49639 335 aaPredicted RBP12.67□□□□□ -0.38
CRTC3-208ENST00000560098 PRR20EP86478 221 aa12.67□□□□□ -0.38
CRTC3-208ENST00000560098 PRR20CP86479 221 aa12.67□□□□□ -0.38
CRTC3-208ENST00000560098 PRR20DP86480 221 aa12.67□□□□□ -0.38
CRTC3-208ENST00000560098 PRR20BP86481 221 aa12.67□□□□□ -0.38
CRTC3-208ENST00000560098 PRR20AP86496 221 aa12.67□□□□□ -0.38
CRTC3-208ENST00000560098 RNASE10Q5GAN6 216 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms