RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 AP3S1Q92572 193 aa10.08□□□□□ -0.8
SNRPA1-204ENST00000558020 MRGPRFQ96AM1 343 aa10.08□□□□□ -0.8
SNRPA1-204ENST00000558020 PDCD10Q9BUL8 212 aa10.08□□□□□ -0.8
SNRPA1-204ENST00000558020 FUNDC2Q9BWH2 189 aa10.08□□□□□ -0.8
SNRPA1-204ENST00000558020 CSTL1Q9H114 145 aa10.08□□□□□ -0.8
SNRPA1-204ENST00000558020 MPTX1A8MV57 137 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 FAM25AB3EWG3 89 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 FAM25CB3EWG5 89 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 FAM25GB3EWG6 89 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 CORTO00230 105 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 HPGDSO60760 199 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 SCGB2A1O75556 95 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 IFNA17P01571 189 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 ELK1P19419 428 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 TBPP20226 339 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 VBP1P61758 197 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 NCS1P62166 190 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 RNASE10Q5GAN6 216 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 GATAD1Q8WUU5 269 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 LINC00476Q8WZB0 136 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 TMEM231Q9H6L2 316 aa10.07□□□□□ -0.8
SNRPA1-204ENST00000558020 IGKV3-7A0A075B6H7 116 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 DNASE2O00115 360 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 IGKV1-39P01597 117 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 IGKV1D-39P04432 117 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 TFPI2P48307 235 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 AKR1C2P52895 323 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 PIGPP57054 158 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 RND3P61587 244 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 RPL11P62913 178 aaKnown RBP10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 APRG1Q8IVJ8 170 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 ARRDC1Q8N5I2 433 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 SLC35G3Q8N808 338 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 ZFAND1Q8TCF1 268 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 RRNAD1Q96FB5 475 aaKnown RBP10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 ENY2Q9NPA8 101 aa10.06□□□□□ -0.8
SNRPA1-204ENST00000558020 IGHV3-49A0A0A0MS15 119 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 M0QYG6 137 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 B3GALNT1O75752 331 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 DFFBO76075 338 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 IGHV3-48P01763 117 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 ZNF600Q6ZNG1 722 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 TCF24Q7RTU0 167 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 GBGT1Q8N5D6 347 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 CCDC71LQ8N9Z2 235 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 RARRES2Q99969 163 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 COPZ2Q9P299 210 aa10.05□□□□□ -0.8
SNRPA1-204ENST00000558020 C3orf85A0A1B0GTC6 90 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 A0A1W2PS18 150 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 ST8SIA3O43173 380 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 NPPCP23582 126 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 TRIM16LQ309B1 348 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 FAM90A2PQ658T7 463 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 TOMM20LQ6UXN7 152 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 TERB2Q8NHR7 220 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 RNASE11Q8TAA1 199 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 NARS2Q96I59 477 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 MFFQ9GZY8 342 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 KLK11Q9UBX7 282 aa10.04□□□□□ -0.8
SNRPA1-204ENST00000558020 IGHV3OR16-13A0A075B7E8 117 aa10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 IGHV3-74A0A0B4J1X5 117 aa10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 TRAV2A0A0B4J234 112 aa10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 A0A0B4J293 547 aa10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 TMEM50AO95807 157 aa10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 CD3DP04234 171 aa10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 IFNA4P05014 189 aa10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 ZNF182P17025 639 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 PI3P19957 117 aa10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 LHFPL1Q86WI0 220 aa10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 MTFP1Q9UDX5 166 aa10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 PUS1Q9Y606 427 aaKnown RBP eCLIP10.03□□□□□ -0.8
SNRPA1-204ENST00000558020 EPPK1P58107 5090 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 IGKV1-5P01602 117 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 ETV6P41212 452 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 HOXA1P49639 335 aaPredicted RBP10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 TAS2R19P59542 299 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 EWSR1Q01844 656 aaKnown RBP eCLIP10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 IZUMO4Q1ZYL8 232 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 SPINK9Q5DT21 86 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 OR11H2Q8NH07 326 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 OR52I2Q8NH67 350 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 PHLDA1Q8WV24 401 aaPredicted RBP10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 TMEM230Q96A57 120 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 METTL26Q96S19 204 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 TP53RKQ96S44 253 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 MS4A6AQ9H2W1 248 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 VSIRQ9H7M9 311 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 EXTL2Q9UBQ6 330 aa10.02□□□□□ -0.81
SNRPA1-204ENST00000558020 TRAV30A0A087WSZ9 112 aa10.01□□□□□ -0.81
SNRPA1-204ENST00000558020 RAB3DO95716 219 aa10.01□□□□□ -0.81
SNRPA1-204ENST00000558020 OPRK1P41145 380 aa10.01□□□□□ -0.81
SNRPA1-204ENST00000558020 RPL5P46777 297 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-204ENST00000558020 EIF2B2P49770 351 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-204ENST00000558020 TMEM187Q14656 261 aa10.01□□□□□ -0.81
SNRPA1-204ENST00000558020 SCGB2B2Q4G0G5 96 aa10.01□□□□□ -0.81
SNRPA1-204ENST00000558020 RNASE12Q5GAN4 147 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-204ENST00000558020 FAM219AQ8IW50 185 aa10.01□□□□□ -0.81
SNRPA1-204ENST00000558020 TMEM229BQ8NBD8 167 aa10.01□□□□□ -0.81
SNRPA1-204ENST00000558020 C11orf45Q8TAV5 145 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms