RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 OSTCQ9NRP0 149 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 TRAV5A0A0B4J249 113 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 IGHV2OR16-5A0A0B4J2B6 119 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 IGHV1-18A0A0C4DH31 117 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 SRRM4A7MD48 611 aaKnown RBP4.42□□□□□ -1.7
LIMA1-212ENST00000552491 ISLRO14498 428 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 MGST3O14880 152 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 REG1AP05451 166 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 C3orf79P0CE67 100 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 SUMO1P63165 101 aaKnown RBP4.42□□□□□ -1.7
LIMA1-212ENST00000552491 SLAQ13239 276 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 TIGITQ495A1 244 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 TMEM164Q5U3C3 297 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 GDF5OSQ5U4N7 250 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 Q6ZVH6 145 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 OR9G1Q8NH87 305 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 PPP1R35Q8TAP8 253 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 IGF2BP2-AS1Q96M15 143 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 WNT10AQ9GZT5 417 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 CALYQ9NYX4 217 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 FOXA2Q9Y261 457 aaPredicted RBP4.42□□□□□ -1.7
LIMA1-212ENST00000552491 RAI1Q7Z5J4 1906 aaPredicted RBP4.42□□□□□ -1.7
LIMA1-212ENST00000552491 ROS1P08922 2347 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 BDP1A6H8Y1 2624 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 ITGB1BP1O14713 200 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 ZNF253O75346 499 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 HYPMO75409 117 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 IGKV1-16P04430 117 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 IGLC2P0DOY2 106 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 IGLC3P0DOY3 106 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 HOXC12P31275 282 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 MZT1Q08AG7 82 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 SPATA45Q537H7 98 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 LCN12Q6JVE5 192 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 ATOH7Q8N100 152 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 TSKUQ8WUA8 353 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 KCNS1Q96KK3 526 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 SSBP3Q9BWW4 388 aaPredicted RBP4.42□□□□□ -1.7
LIMA1-212ENST00000552491 ENY2Q9NPA8 101 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 TECRQ9NZ01 308 aaKnown RBP4.42□□□□□ -1.7
LIMA1-212ENST00000552491 CDC42EP3Q9UKI2 254 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 ZFP30Q9Y2G7 519 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 ABCA1O95477 2261 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 DYSFO75923 2080 aa4.42□□□□□ -1.7
LIMA1-212ENST00000552491 SMIM27A0A1W2PRY6 76 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 LNP1A1A4G5 178 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 OR7C2O60412 319 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 ZNF324O75467 553 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-212ENST00000552491 IGLV1-44P01699 117 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 HLA-DQA1P01909 254 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 AMY1AP04745 511 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 MGST1P10620 155 aaKnown RBP4.41□□□□□ -1.7
LIMA1-212ENST00000552491 RAB7AP51149 207 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 PRRX1P54821 245 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 SSBP2P81877 361 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-212ENST00000552491 RTL8BQ17RB0 113 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 MBNL2Q5VZF2 373 aaKnown RBP4.41□□□□□ -1.7
LIMA1-212ENST00000552491 ALKBH2Q6NS38 261 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 MOGAT3Q86VF5 341 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 C1orf210Q8IVY1 113 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 LYG1Q8N1E2 194 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 OR10W1Q8NGF6 305 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 SNRNP40Q96DI7 357 aaKnown RBP4.41□□□□□ -1.7
LIMA1-212ENST00000552491 SLC35E1Q96K37 410 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 FAM167A-AS1Q96KT0 104 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 FER1L6-AS2Q96M78 137 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 C19orf24Q9BVV8 132 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 ARRDC1-AS1Q9H2J1 176 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 GCM1Q9NP62 436 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 UQCR10Q9UDW1 63 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 CBY1Q9Y3M2 126 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 OR51B2Q9Y5P1 312 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 RP1L1Q8IWN7 2480 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-212ENST00000552491 TRAV34A0A0B4J273 112 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 A0A1W2PRE2 83 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 E7EUB6 86 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 J3QR06 171 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 DLL1O00548 723 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 CHRNB4P30926 498 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 CFHR2P36980 270 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 GNG10P50151 68 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 PPOXP50336 477 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 SRSF6Q13247 344 aaKnown RBP4.41□□□□□ -1.7
LIMA1-212ENST00000552491 IBA57Q5T440 356 aaKnown RBP4.41□□□□□ -1.7
LIMA1-212ENST00000552491 C19orf35Q6ZS72 473 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 PNKDQ8N490 385 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 C11orf42Q8N5U0 333 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-212ENST00000552491 C1orf162Q8NEQ5 155 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-212ENST00000552491 STARD4Q96DR4 205 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 OR2V2Q96R30 315 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 CLEC7AQ9BXN2 247 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 TP73-AS1Q9UF72 201 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 DMXL2Q8TDJ6 3036 aa4.41□□□□□ -1.7
LIMA1-212ENST00000552491 TEX50A0A1B0GTY4 177 aa4.4□□□□□ -1.7
LIMA1-212ENST00000552491 A0A1W2PN81 502 aa4.4□□□□□ -1.7
LIMA1-212ENST00000552491 PSMB11A5LHX3 300 aa4.4□□□□□ -1.7
LIMA1-212ENST00000552491 DPRXA6NFQ7 191 aa4.4□□□□□ -1.7
LIMA1-212ENST00000552491 VWC2LB2RUY7 222 aa4.4□□□□□ -1.7
LIMA1-212ENST00000552491 TCF21O43680 179 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms