RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 K7EIM0 57 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 HAX1O00165 279 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 CORTO00230 105 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 CYB5BO43169 146 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 NXPH3O95157 252 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 NDUFB8O95169 186 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 PRH1P02810 166 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 RPLP1P05386 114 aaKnown RBP4.55□□□□□ -1.68
ABCF1-207ENST00000542772 REG1AP05451 166 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 PF4V1P10720 104 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 CD28P10747 220 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 IAPPP10997 89 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 DEFA4P12838 97 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 PVALBP20472 110 aaPredicted RBP4.55□□□□□ -1.68
ABCF1-207ENST00000542772 NPY1RP25929 384 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 P2RY1P47900 373 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 RAB11AP62491 216 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 RPL23AP62750 156 aaKnown RBP4.55□□□□□ -1.68
ABCF1-207ENST00000542772 Q5BKY6 102 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 FAM209BQ5JX69 171 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 C11orf87Q6NUJ2 197 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 PRSS54Q6PEW0 395 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 TMEM65Q6PI78 240 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 FAM223AQ8IWN6 122 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 TMEM252Q8N6L7 170 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 TMEM116Q8NCL8 245 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 SLC24A4Q8NFF2 622 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 OR4X2Q8NGF9 303 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 SCARB1Q8WTV0 552 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 MS4A10Q96PG2 267 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 MDFIQ99750 246 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 TXN2Q99757 166 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 FNDC4Q9H6D8 234 aaPredicted RBP4.55□□□□□ -1.68
ABCF1-207ENST00000542772 LYRM2Q9NU23 88 aaPredicted RBP4.55□□□□□ -1.68
ABCF1-207ENST00000542772 OR5AC2Q9NZP5 309 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 FBXL7Q9UJT9 491 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 STRAPQ9Y3F4 350 aaKnown RBP4.55□□□□□ -1.68
ABCF1-207ENST00000542772 LSM5Q9Y4Y9 91 aaKnown RBP4.55□□□□□ -1.68
ABCF1-207ENST00000542772 TSSC4Q9Y5U2 329 aaPredicted RBP4.55□□□□□ -1.68
ABCF1-207ENST00000542772 ATRQ13535 2644 aa4.55□□□□□ -1.68
ABCF1-207ENST00000542772 TENM1Q9UKZ4 2725 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.54□□□□□ -1.68
ABCF1-207ENST00000542772 TRBV7-1A0A0A6YYK4 115 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 TCRBV4S1A1TA0A5B7 111 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 FAM24AA6NFZ4 105 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 HMSDA8MTL9 139 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 F8W735 103 aaPredicted RBP4.54□□□□□ -1.68
ABCF1-207ENST00000542772 OR2J3O76001 311 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 SCAF4O95104 1147 aaKnown RBP4.54□□□□□ -1.68
ABCF1-207ENST00000542772 SCGB1D2O95969 90 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 MT-CO2P00403 227 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 IFNA10P01566 189 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 TRGV3P03979 118 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 HNRNPCP07910 306 aaKnown RBP eCLIP4.54□□□□□ -1.68
ABCF1-207ENST00000542772 HOXA1P49639 335 aaPredicted RBP4.54□□□□□ -1.68
ABCF1-207ENST00000542772 RHOGP84095 191 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 ATP5G2Q06055 141 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 CD69Q07108 199 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 EXOSC2Q13868 293 aaKnown RBP4.54□□□□□ -1.68
ABCF1-207ENST00000542772 SPANXN5Q5MJ07 72 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 ETFRF1Q6IPR1 90 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 ETV3LQ6ZN32 361 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 C19orf35Q6ZS72 473 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 HAPLN4Q86UW8 402 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 NDUFA11Q86Y39 141 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 TCTE3Q8IZS6 198 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 ZNF502Q8TBZ5 544 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 CXorf58Q96LI9 332 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 OR4C12Q96R67 309 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 CITED2Q99967 270 aaPredicted RBP4.54□□□□□ -1.68
ABCF1-207ENST00000542772 NEURL2Q9BR09 285 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 GGACTQ9BVM4 153 aa4.54□□□□□ -1.68
ABCF1-207ENST00000542772 RANGRFQ9HD47 186 aaPredicted RBP4.54□□□□□ -1.68
ABCF1-207ENST00000542772 TRAV30A0A087WSZ9 112 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 L7N2F9 121 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 SSSCA1O60232 199 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 CCNKO75909 580 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 HSPB1P04792 205 aaKnown RBP4.53□□□□□ -1.68
ABCF1-207ENST00000542772 CLEC3BP05452 202 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 CTSGP08311 255 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 PET100P0DJ07 73 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 RPL12P30050 165 aaKnown RBP4.53□□□□□ -1.68
ABCF1-207ENST00000542772 S100A11P31949 105 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 SULT1A1P50225 295 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 MFAP4P55083 255 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 TPPP2P59282 170 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 VAMP2P63027 116 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 NHLH2Q02577 135 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 ARL16Q0P5N6 197 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 GAMTQ14353 236 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 ATP6V1FQ16864 119 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 VWC2Q2TAL6 325 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 C15orf32Q32M92 178 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 SHISA2Q6UWI4 295 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 C12orf54Q6X4T0 127 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 LCNL1Q6ZST4 164 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 ZNF546Q86UE3 836 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 OR10P1Q8NGE3 313 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 OR2T35Q8NGX2 323 aa4.53□□□□□ -1.68
ABCF1-207ENST00000542772 OR4X1Q8NH49 305 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms