RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CCDC140Q96MF4 163 aa14.96□□□□□ -0.01
DDX55-207ENST00000540763 SEC22CQ9BRL7 303 aa14.96□□□□□ -0.01
DDX55-207ENST00000540763 GPR61Q9BZJ8 451 aa14.96□□□□□ -0.01
DDX55-207ENST00000540763 HIPK2Q9H2X6 1198 aa14.96□□□□□ -0.01
DDX55-207ENST00000540763 CMYA5Q8N3K9 4069 aa14.96□□□□□ -0.01
DDX55-207ENST00000540763 ANKRD34BA5PLL1 514 aa14.95□□□□□ -0.02
DDX55-207ENST00000540763 MFSD2BA6NFX1 497 aa14.95□□□□□ -0.02
DDX55-207ENST00000540763 INMT-MINDY4F8WBC2 141 aa14.95□□□□□ -0.02
DDX55-207ENST00000540763 MED6O75586 246 aa14.95□□□□□ -0.02
DDX55-207ENST00000540763 LY86O95711 162 aa14.95□□□□□ -0.02
DDX55-207ENST00000540763 C12orf45Q8N5I9 185 aaPredicted RBP14.95□□□□□ -0.02
DDX55-207ENST00000540763 ZNF502Q8TBZ5 544 aa14.95□□□□□ -0.02
DDX55-207ENST00000540763 DTD1Q8TEA8 209 aa14.95□□□□□ -0.02
DDX55-207ENST00000540763 HEYLQ9NQ87 328 aaPredicted RBP14.95□□□□□ -0.02
DDX55-207ENST00000540763 TGP01266 2768 aa14.95□□□□□ -0.02
DDX55-207ENST00000540763 SNRPGP15A8MWD9 76 aa14.94□□□□□ -0.02
DDX55-207ENST00000540763 K7EIM0 57 aa14.94□□□□□ -0.02
DDX55-207ENST00000540763 HOXD3P31249 432 aaPredicted RBP14.94□□□□□ -0.02
DDX55-207ENST00000540763 ATP5IP56385 69 aaPredicted RBP14.94□□□□□ -0.02
DDX55-207ENST00000540763 C2orf83Q53S99 150 aa14.94□□□□□ -0.02
DDX55-207ENST00000540763 NOXA1Q86UR1 476 aa14.94□□□□□ -0.02
DDX55-207ENST00000540763 SLC24A4Q8NFF2 622 aa14.94□□□□□ -0.02
DDX55-207ENST00000540763 RBKSQ9H477 322 aa14.94□□□□□ -0.02
DDX55-207ENST00000540763 GAR1Q9NY12 217 aaKnown RBP14.94□□□□□ -0.02
DDX55-207ENST00000540763 U3KQ87 197 aa14.94□□□□□ -0.02
DDX55-207ENST00000540763 I3L2K1 104 aa14.93□□□□□ -0.02
DDX55-207ENST00000540763 NXPH3O95157 252 aa14.93□□□□□ -0.02
DDX55-207ENST00000540763 TRBV12-3P01733 135 aa14.93□□□□□ -0.02
DDX55-207ENST00000540763 FCGR2BP31994 310 aaPredicted RBP14.93□□□□□ -0.02
DDX55-207ENST00000540763 SLURP1P55000 103 aa14.93□□□□□ -0.02
DDX55-207ENST00000540763 OR4D5Q8NGN0 318 aa14.93□□□□□ -0.02
DDX55-207ENST00000540763 MISP3Q96FF7 219 aa14.93□□□□□ -0.02
DDX55-207ENST00000540763 CIB3Q96Q77 187 aaPredicted RBP14.93□□□□□ -0.02
DDX55-207ENST00000540763 MPTX1A8MV57 137 aa14.92□□□□□ -0.02
DDX55-207ENST00000540763 BMPR1BO00238 502 aa14.92□□□□□ -0.02
DDX55-207ENST00000540763 OVOL1O14753 267 aa14.92□□□□□ -0.02
DDX55-207ENST00000540763 GGCTO75223 188 aaKnown RBP14.92□□□□□ -0.02
DDX55-207ENST00000540763 DCTN2Q13561 401 aaKnown RBP14.92□□□□□ -0.02
DDX55-207ENST00000540763 RPEL1Q2QD12 228 aa14.92□□□□□ -0.02
DDX55-207ENST00000540763 SAMD5Q5TGI4 173 aa14.92□□□□□ -0.02
DDX55-207ENST00000540763 SCARB1Q8WTV0 552 aa14.92□□□□□ -0.02
DDX55-207ENST00000540763 DCUN1D4Q92564 292 aa14.92□□□□□ -0.02
DDX55-207ENST00000540763 DLX4Q92988 240 aaPredicted RBP14.92□□□□□ -0.02
DDX55-207ENST00000540763 TXN2Q99757 166 aa14.92□□□□□ -0.02
DDX55-207ENST00000540763 C21orf62Q9NYP8 219 aa14.92□□□□□ -0.02
DDX55-207ENST00000540763 SYNGR2O43760 224 aa14.91□□□□□ -0.02
DDX55-207ENST00000540763 MT-CO2P00403 227 aa14.91□□□□□ -0.02
DDX55-207ENST00000540763 NPY1RP25929 384 aa14.91□□□□□ -0.02
DDX55-207ENST00000540763 ARL3P36405 182 aa14.91□□□□□ -0.02
DDX55-207ENST00000540763 ID3Q02535 119 aa14.91□□□□□ -0.02
DDX55-207ENST00000540763 KLF5Q13887 457 aaPredicted RBP14.91□□□□□ -0.02
DDX55-207ENST00000540763 IAH1Q2TAA2 248 aaPredicted RBP14.91□□□□□ -0.02
DDX55-207ENST00000540763 SPSB3Q6PJ21 355 aa14.91□□□□□ -0.02
DDX55-207ENST00000540763 CLEC19AQ6UXS0 136 aa14.91□□□□□ -0.02
DDX55-207ENST00000540763 RNASEH2CQ8TDP1 164 aaKnown RBP14.91□□□□□ -0.02
DDX55-207ENST00000540763 BSCL2Q96G97 398 aaPredicted RBP14.91□□□□□ -0.02
DDX55-207ENST00000540763 NKX2-1P43699 371 aaPredicted RBP14.9□□□□□ -0.02
DDX55-207ENST00000540763 MFAP4P55083 255 aa14.9□□□□□ -0.02
DDX55-207ENST00000540763 TATDN3Q17R31 274 aa14.9□□□□□ -0.02
DDX55-207ENST00000540763 C1QL4Q86Z23 238 aa14.9□□□□□ -0.02
DDX55-207ENST00000540763 OR10C1Q96KK4 312 aa14.9□□□□□ -0.02
DDX55-207ENST00000540763 S4R3C0 116 aa14.9□□□□□ -0.02
DDX55-207ENST00000540763 RPS10-NUDT3A0A1W2PQS6 291 aa14.89□□□□□ -0.03
DDX55-207ENST00000540763 F8W735 103 aaPredicted RBP14.89□□□□□ -0.03
DDX55-207ENST00000540763 IGHV3-23P01764 117 aa14.89□□□□□ -0.03
DDX55-207ENST00000540763 CLEC3BP05452 202 aa14.89□□□□□ -0.03
DDX55-207ENST00000540763 IGLL1P15814 213 aa14.89□□□□□ -0.03
DDX55-207ENST00000540763 GPR183P32249 361 aa14.89□□□□□ -0.03
DDX55-207ENST00000540763 INSL3P51460 131 aa14.89□□□□□ -0.03
DDX55-207ENST00000540763 C9orf66Q5T8R8 295 aa14.89□□□□□ -0.03
DDX55-207ENST00000540763 ZBTB8BQ8NAP8 495 aaPredicted RBP14.89□□□□□ -0.03
DDX55-207ENST00000540763 NOTCH1P46531 2555 aa14.89□□□□□ -0.03
DDX55-207ENST00000540763 PPP5D1E7EU14 171 aa14.88□□□□□ -0.03
DDX55-207ENST00000540763 TGOLN2O43493 480 aa14.88□□□□□ -0.03
DDX55-207ENST00000540763 IFNA10P01566 189 aa14.88□□□□□ -0.03
DDX55-207ENST00000540763 RPP30P78346 268 aaKnown RBP14.88□□□□□ -0.03
DDX55-207ENST00000540763 KPRPQ5T749 579 aaPredicted RBP14.88□□□□□ -0.03
DDX55-207ENST00000540763 GPHB5Q86YW7 130 aa14.88□□□□□ -0.03
DDX55-207ENST00000540763 UXS1Q8NBZ7 420 aa14.88□□□□□ -0.03
DDX55-207ENST00000540763 TMEM170AQ8WVE7 144 aa14.88□□□□□ -0.03
DDX55-207ENST00000540763 PINX1Q96BK5 328 aaKnown RBP14.88□□□□□ -0.03
DDX55-207ENST00000540763 C7orf66A4D0T2 115 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 LGALS9O00182 355 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 WRBO00258 174 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 SLC25A4P12235 298 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 SPNP16150 400 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 OPRK1P41145 380 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 NPBWR1P48145 328 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 ETFRF1Q6IPR1 90 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 ACSM6Q6P461 480 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 GSG1LQ6UXU4 331 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 REC114Q7Z4M0 266 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 C2orf50Q96LR7 162 aa14.87□□□□□ -0.03
DDX55-207ENST00000540763 FNDC4Q9H6D8 234 aaPredicted RBP14.87□□□□□ -0.03
DDX55-207ENST00000540763 IGHV3-21A0A0B4J1V1 117 aa14.86□□□□□ -0.03
DDX55-207ENST00000540763 C5orf51A6NDU8 294 aa14.86□□□□□ -0.03
DDX55-207ENST00000540763 SEC14L6B5MCN3 397 aa14.86□□□□□ -0.03
DDX55-207ENST00000540763 G3V4G9 280 aa14.86□□□□□ -0.03
DDX55-207ENST00000540763 CCSO14618 274 aa14.86□□□□□ -0.03
DDX55-207ENST00000540763 SYNJ2BPP57105 145 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms