RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ELLP55199 621 aaPredicted RBP6.64□□□□□ -1.35
USP28-205ENST00000537706 TMEM50BP56557 158 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 SCGB2B2Q4G0G5 96 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 C4orf46Q504U0 113 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 TMEM41BQ5BJD5 291 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 ZNF767PQ75MW2 155 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 SLC25A42Q86VD7 318 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 OR4K15Q8NH41 348 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 PECRQ9BY49 303 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 METTL9Q9H1A3 318 aa6.64□□□□□ -1.35
USP28-205ENST00000537706 SNAPC5O75971 98 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 C8orf88P0DMB2 117 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 TAS2R46P59540 309 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 HTD2P86397 168 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 C15orf32Q32M92 178 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 LPCAT3Q6P1A2 487 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 TMED4Q7Z7H5 227 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 OR5AN1Q8NGI8 311 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 OR10K1Q8NGX5 313 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 MRGPRFQ96AM1 343 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 TAF9BQ9HBM6 251 aa6.63□□□□□ -1.35
USP28-205ENST00000537706 TGOLN2O43493 480 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 RBM11P57052 281 aaKnown RBP6.62□□□□□ -1.35
USP28-205ENST00000537706 TAS2R31P59538 309 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 UBE2MP61081 183 aaKnown RBP6.62□□□□□ -1.35
USP28-205ENST00000537706 DHRS2Q13268 280 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 ARFRP1Q13795 201 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 GNMTQ14749 295 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 NHLRC3Q5JS37 347 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 HOGA1Q86XE5 327 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 PDPNQ86YL7 162 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 OR5H2Q8NGV7 314 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 GALMQ96C23 342 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 HSF4Q9ULV5 492 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 TRBV9A0A0B4J1U6 114 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 GOSR2O14653 212 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 APELAP0DMC3 54 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 C4BPBP20851 252 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 H2BFSP57053 126 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 TSPAN5P62079 268 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 Q6ZSN1 163 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 APRG1Q8IVJ8 170 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 C12orf45Q8N5I9 185 aaPredicted RBP6.62□□□□□ -1.35
USP28-205ENST00000537706 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 CHRDL1Q9BU40 450 aa6.62□□□□□ -1.35
USP28-205ENST00000537706 APOBP04114 4563 aaKnown RBP6.61□□□□□ -1.35
USP28-205ENST00000537706 C15orf61A6NNL5 157 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 ST8SIA5O15466 376 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 RBMXL2O75526 392 aaKnown RBP6.61□□□□□ -1.35
USP28-205ENST00000537706 OR2J3O76001 311 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 S1PR2O95136 353 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 PMP2P02689 132 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 S100A1P23297 94 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 ZBTB25P24278 435 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 LGALSLQ3ZCW2 172 aaPredicted RBP6.61□□□□□ -1.35
USP28-205ENST00000537706 RPL39P5Q59GN2 51 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 CLEC19AQ6UXS0 136 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 LHFPL1Q86WI0 220 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 TMEM17Q86X19 198 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 SLC7A5P1Q8MH63 180 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 TERB2Q8NHR7 220 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 EEF1AKMT3Q96AZ1 226 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 IFI27L2Q9H2X8 130 aa6.61□□□□□ -1.35
USP28-205ENST00000537706 HMSDA8MTL9 139 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 GEMIN2O14893 280 aaKnown RBP6.6□□□□□ -1.35
USP28-205ENST00000537706 SLC22A5O76082 557 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 DTYMKP23919 212 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 PPP1R1AQ13522 171 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 SURF2Q15527 256 aaPredicted RBP6.6□□□□□ -1.35
USP28-205ENST00000537706 TNXAQ16473 311 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 C12orf74Q32Q52 190 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 MITD1Q8WV92 249 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 C17orf77Q96MU5 243 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 SCGB3A2Q96PL1 93 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 PLEKHJ1Q9NW61 149 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 NBDYA0A0U1RRE5 68 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 C9orf170A2RU37 121 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 FAM90A7PA6NKC0 464 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
USP28-205ENST00000537706 F8W735 103 aaPredicted RBP6.6□□□□□ -1.35
USP28-205ENST00000537706 TSC22D2O75157 780 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 ACTL6BO94805 426 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 PRH1P02810 166 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 HLA-GP17693 338 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 SIGIRRQ6IA17 410 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 TEX261Q6UWH6 196 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 C6orf201Q7Z4U5 140 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 C15orf53Q8NAA6 179 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 OR5AP2Q8NGF4 316 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 MARCH1Q8TCQ1 289 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 SPIN2AQ99865 258 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 SPIN2BQ9BPZ2 258 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 EHFQ9NZC4 300 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 MDFICQ9P1T7 246 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 DMRT1Q9Y5R6 373 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 U3KQ87 197 aa6.6□□□□□ -1.35
USP28-205ENST00000537706 PDCD6O75340 191 aa6.59□□□□□ -1.35
USP28-205ENST00000537706 SIX6O95475 246 aa6.59□□□□□ -1.35
USP28-205ENST00000537706 RCC1P18754 421 aaPredicted RBP6.59□□□□□ -1.35
USP28-205ENST00000537706 HTR2BP41595 481 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms