RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 HSPB9Q9BQS6 159 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 GGACTQ9BVM4 153 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 IGHV7-81A0A0B4J1V7 117 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 SH2D7A6NKC9 451 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 TEX46H3BTG2 121 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 FGF16O43320 207 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 HLA-DRB1P01911 266 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 MDKP21741 143 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 FGF7P21781 194 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 MFAP2P55001 183 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 LY6EQ16553 131 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 MLANAQ16655 118 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 ARPC1AQ92747 370 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 FBXO7Q9Y3I1 522 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 TSPAN9O75954 239 aa16.09■□□□□ 0.17
TNFRSF1A-205ENST00000534885 BTN1A1Q13410 526 aa16.09■□□□□ 0.17
TNFRSF1A-205ENST00000534885 TREML4Q6UXN2 200 aa16.09■□□□□ 0.17
TNFRSF1A-205ENST00000534885 C5orf56Q8N8D9 126 aa16.09■□□□□ 0.17
TNFRSF1A-205ENST00000534885 ZNF114Q8NC26 417 aa16.09■□□□□ 0.17
TNFRSF1A-205ENST00000534885 ZNF705EA8MWA4 302 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-205ENST00000534885 SUB1P53999 127 aaKnown RBP eCLIP16.09■□□□□ 0.17
TNFRSF1A-205ENST00000534885 WDR83OSQ9Y284 106 aa16.09■□□□□ 0.17
TNFRSF1A-205ENST00000534885 FHITP49789 147 aa16.08■□□□□ 0.16
TNFRSF1A-205ENST00000534885 BTNL8Q6UX41 500 aa16.08■□□□□ 0.16
TNFRSF1A-205ENST00000534885 SRSF8Q9BRL6 282 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-205ENST00000534885 FNDC4Q9H6D8 234 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF1A-205ENST00000534885 MOB4Q9Y3A3 225 aa16.08■□□□□ 0.16
TNFRSF1A-205ENST00000534885 DMRT1Q9Y5R6 373 aa16.08■□□□□ 0.16
TNFRSF1A-205ENST00000534885 AMY1AP04745 511 aa16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 KRTAP1-1Q07627 177 aa16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 ASPHD1Q5U4P2 390 aa16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 F11RQ9Y624 299 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 SONP18583 2426 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 A6NDX4 124 aa16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 EGR2P11161 476 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 CD69Q07108 199 aa16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 OR1P1Q8NH06 330 aa16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 RNASEH2CQ8TDP1 164 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 NPCDR1Q9BY65 106 aa16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 NPVFQ9HCQ7 196 aa16.07■□□□□ 0.16
TNFRSF1A-205ENST00000534885 TSPAN4O14817 238 aa16.06■□□□□ 0.16
TNFRSF1A-205ENST00000534885 IGHV3-48P01763 117 aa16.06■□□□□ 0.16
TNFRSF1A-205ENST00000534885 OPRK1P41145 380 aa16.06■□□□□ 0.16
TNFRSF1A-205ENST00000534885 PVRIGQ6DKI7 326 aa16.06■□□□□ 0.16
TNFRSF1A-205ENST00000534885 PSMG3Q9BT73 122 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-205ENST00000534885 AKR1C1Q04828 323 aa16.06■□□□□ 0.16
TNFRSF1A-205ENST00000534885 GAMTQ14353 236 aa16.06■□□□□ 0.16
TNFRSF1A-205ENST00000534885 C9orf139Q6ZV77 190 aa16.06■□□□□ 0.16
TNFRSF1A-205ENST00000534885 MISP3Q96FF7 219 aa16.06■□□□□ 0.16
TNFRSF1A-205ENST00000534885 IGHV4-59P01825 116 aa16.05■□□□□ 0.16
TNFRSF1A-205ENST00000534885 PRH1P02810 166 aa16.05■□□□□ 0.16
TNFRSF1A-205ENST00000534885 IL17RELQ6ZVW7 336 aa16.05■□□□□ 0.16
TNFRSF1A-205ENST00000534885 SLC16A13Q7RTY0 426 aa16.05■□□□□ 0.16
TNFRSF1A-205ENST00000534885 LFNGQ8NES3 379 aa16.05■□□□□ 0.16
TNFRSF1A-205ENST00000534885 MGST2Q99735 147 aa16.05■□□□□ 0.16
TNFRSF1A-205ENST00000534885 WNT10AQ9GZT5 417 aa16.05■□□□□ 0.16
TNFRSF1A-205ENST00000534885 LSM4Q9Y4Z0 139 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1A-205ENST00000534885 LINC01548A6NM66 108 aa16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 FNDC10F2Z333 226 aa16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 ATF4P18848 351 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 Q6ZRG5 221 aa16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 CENPVQ7Z7K6 275 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 OR2T6Q8NHC8 308 aa16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 VSIRQ9H7M9 311 aa16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 PARP11Q9NR21 331 aa16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 ATP6V0E1O15342 81 aa16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 ELLP55199 621 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 CACNG8Q8WXS5 425 aa16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 SAT2Q96F10 170 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 ZNF48Q96MX3 618 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 TIMM9Q9Y5J7 89 aa16.04■□□□□ 0.16
TNFRSF1A-205ENST00000534885 IGKV1OR2-108A0A075B7D4 117 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 UMAD1C9J7I0 102 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 DEFA4P12838 97 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 RAB5CP51148 216 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 AKR1C8PQ5T2L2 129 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 TEPPQ6URK8 271 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 FAM213BQ8TBF2 198 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 MRPL36Q9P0J6 103 aaKnown RBP16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 PITPNC1Q9UKF7 332 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 OTOGQ6ZRI0 2925 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 IGHV3-21A0A0B4J1V1 117 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 TRIM77I1YAP6 450 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 FOSL1P15407 271 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 GPX4P36969 197 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 IER3P46695 156 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 CAMLGP49069 296 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 SERF2P84101 59 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 ACSM6Q6P461 480 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 ZNF709Q8N972 641 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 ACY3Q96HD9 319 aa16.03■□□□□ 0.16
TNFRSF1A-205ENST00000534885 MPDU1O75352 247 aa16.02■□□□□ 0.15
TNFRSF1A-205ENST00000534885 CRYGCP07315 174 aa16.02■□□□□ 0.15
TNFRSF1A-205ENST00000534885 ZNF616Q08AN1 781 aa16.02■□□□□ 0.15
TNFRSF1A-205ENST00000534885 TMEM144Q7Z5S9 345 aa16.02■□□□□ 0.15
TNFRSF1A-205ENST00000534885 SGMS2Q8NHU3 365 aa16.02■□□□□ 0.15
TNFRSF1A-205ENST00000534885 GGTLC1Q9BX51 225 aa16.02■□□□□ 0.15
TNFRSF1A-205ENST00000534885 NPIPB5A8MRT5 1133 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 SLC35E1Q96K37 410 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 HRH4Q9H3N8 390 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 978.8 ms