RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 BLCAPP62952 87 aa17.3■□□□□ 0.36
PACSIN3-209ENST00000532457 RUNX1Q01196 453 aa17.3■□□□□ 0.36
PACSIN3-209ENST00000532457 ARSJQ5FYB0 599 aaPredicted RBP17.3■□□□□ 0.36
PACSIN3-209ENST00000532457 LFNGQ8NES3 379 aa17.3■□□□□ 0.36
PACSIN3-209ENST00000532457 ABHD5Q8WTS1 349 aa17.3■□□□□ 0.36
PACSIN3-209ENST00000532457 SRSF8Q9BRL6 282 aaKnown RBP17.3■□□□□ 0.36
PACSIN3-209ENST00000532457 BTBD17A6NE02 478 aa17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 CTRB1P17538 263 aa17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 MDKP21741 143 aaPredicted RBP17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 ATP5IP56385 69 aaPredicted RBP17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 ZNF266Q14584 549 aa17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 ATP6V1FQ16864 119 aa17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 CTRB2Q6GPI1 263 aa17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 ZNF114Q8NC26 417 aa17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 TMEM147Q9BVK8 224 aa17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 WNT10AQ9GZT5 417 aa17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 FNDC4Q9H6D8 234 aaPredicted RBP17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 NF1P21359 2839 aa17.29■□□□□ 0.36
PACSIN3-209ENST00000532457 ATP6V0CP27449 155 aa17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 UQCC1Q9NVA1 299 aa17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 UBQLN2Q9UHD9 624 aa17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 PITPNC1Q9UKF7 332 aa17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 F11RQ9Y624 299 aaKnown RBP17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 UBE2L5PA0A1B0GUS4 154 aa17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 ATP6V0E1O15342 81 aa17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 HOXA3O43365 443 aaPredicted RBP17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 TCF21O43680 179 aa17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 PRH1P02810 166 aa17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 SCARB1Q8WTV0 552 aa17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 WDR61Q9GZS3 305 aaKnown RBP17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 SLC25A32Q9H2D1 315 aa17.28■□□□□ 0.36
PACSIN3-209ENST00000532457 IGHV3-48P01763 117 aa17.27■□□□□ 0.36
PACSIN3-209ENST00000532457 SPP1P10451 314 aa17.27■□□□□ 0.36
PACSIN3-209ENST00000532457 SUB1P53999 127 aaKnown RBP eCLIP17.27■□□□□ 0.36
PACSIN3-209ENST00000532457 DLK1P80370 383 aa17.27■□□□□ 0.36
PACSIN3-209ENST00000532457 HSD17B13Q7Z5P4 300 aaPredicted RBP17.27■□□□□ 0.36
PACSIN3-209ENST00000532457 TMEM86BQ8N661 226 aa17.27■□□□□ 0.36
PACSIN3-209ENST00000532457 OR1P1Q8NH06 330 aa17.27■□□□□ 0.36
PACSIN3-209ENST00000532457 OR5R1Q8NH85 324 aa17.27■□□□□ 0.36
PACSIN3-209ENST00000532457 PHYHIPLQ96FC7 376 aa17.27■□□□□ 0.36
PACSIN3-209ENST00000532457 PARP11Q9NR21 331 aa17.27■□□□□ 0.36
PACSIN3-209ENST00000532457 IFNA5P01569 189 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 CRYGCP07315 174 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 HILS1P60008 231 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 EIF5AP63241 154 aaKnown RBP17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 TTC9CQ8N5M4 171 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 OR5T1Q8NG75 326 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 OR2T6Q8NHC8 308 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 SGMS2Q8NHU3 365 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 RSG1Q9BU20 258 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 GGACTQ9BVM4 153 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 MRPL36Q9P0J6 103 aaKnown RBP17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 G3V318 75 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 CD69Q07108 199 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 TREML4Q6UXN2 200 aa17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 MRPL41Q8IXM3 137 aaKnown RBP17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 TAF15Q92804 592 aaKnown RBP eCLIP17.26■□□□□ 0.35
PACSIN3-209ENST00000532457 GAMTQ14353 236 aa17.25■□□□□ 0.35
PACSIN3-209ENST00000532457 SLC25A24Q6NUK1 477 aa17.25■□□□□ 0.35
PACSIN3-209ENST00000532457 RNASEH2CQ8TDP1 164 aaKnown RBP17.25■□□□□ 0.35
PACSIN3-209ENST00000532457 MISP3Q96FF7 219 aa17.25■□□□□ 0.35
PACSIN3-209ENST00000532457 PARD6GQ9BYG4 376 aaPredicted RBP17.25■□□□□ 0.35
PACSIN3-209ENST00000532457 SMCO3A2RU48 225 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 NPIPB5A8MRT5 1133 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 C9orf152Q5JTZ5 239 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 C16orf82Q7Z2V1 217 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 SCGB1C1Q8TD33 95 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 FANCD2OSQ96PS1 177 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 DUX5Q96PT3 197 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 LINC00527Q9UJ94 153 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 WDR83OSQ9Y284 106 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 IGHV3-21A0A0B4J1V1 117 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 RPS10-NUDT3A0A1W2PQS6 291 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 CLDN34H7C241 214 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 SCAF4O95104 1147 aaKnown RBP17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 SEC11BP0C7V7 166 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 VPREB3Q9UKI3 123 aa17.24■□□□□ 0.35
PACSIN3-209ENST00000532457 FGF7P21781 194 aa17.23■□□□□ 0.35
PACSIN3-209ENST00000532457 S100A1P23297 94 aa17.23■□□□□ 0.35
PACSIN3-209ENST00000532457 GPX4P36969 197 aaPredicted RBP17.23■□□□□ 0.35
PACSIN3-209ENST00000532457 BTNL8Q6UX41 500 aa17.23■□□□□ 0.35
PACSIN3-209ENST00000532457 LSM4Q9Y4Z0 139 aaKnown RBP17.23■□□□□ 0.35
PACSIN3-209ENST00000532457 JMJD1CQ15652 2540 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 IGKV1OR2-108A0A075B7D4 117 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 DNAJC9-AS1A6NH13 148 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 M0QZK8 103 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 IGHG2P01859 326 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 ECSCRQ19T08 205 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 C19orf54Q5BKX5 351 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 UNQ5815/PRO19632Q6UWF5 114 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 OR2G3Q8NGZ4 309 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 FAM210AQ96ND0 272 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 NPVFQ9HCQ7 196 aa17.22■□□□□ 0.35
PACSIN3-209ENST00000532457 DEFA4P12838 97 aa17.21■□□□□ 0.35
PACSIN3-209ENST00000532457 OPRK1P41145 380 aa17.21■□□□□ 0.35
PACSIN3-209ENST00000532457 SLC16A13Q7RTY0 426 aa17.21■□□□□ 0.35
PACSIN3-209ENST00000532457 CACNG8Q8WXS5 425 aa17.21■□□□□ 0.35
PACSIN3-209ENST00000532457 MGST2Q99735 147 aa17.21■□□□□ 0.35
PACSIN3-209ENST00000532457 I3L2K1 104 aa17.21■□□□□ 0.35
PACSIN3-209ENST00000532457 AKIRIN2Q53H80 203 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms