RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 IGHV3-21A0A0B4J1V1 117 aa19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 IGHV3-48P01763 117 aa19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 SULT1A1P50225 295 aa19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 SUB1P53999 127 aaKnown RBP eCLIP19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 OR2T6Q8NHC8 308 aa19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 FAM110DQ8TAY7 271 aaPredicted RBP19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 MISP3Q96FF7 219 aa19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 TMEM68Q96MH6 324 aa19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 SMIM3Q9BZL3 60 aa19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 SLC25A31Q9H0C2 315 aa19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 C2CD3Q4AC94 2353 aa19.34■□□□□ 0.69
LDLRAD3-203ENST00000528989 RPL15P61313 204 aaKnown RBP19.33■□□□□ 0.69
LDLRAD3-203ENST00000528989 NUP62P37198 522 aaPredicted RBP19.33■□□□□ 0.68
LDLRAD3-203ENST00000528989 RAB11AP62491 216 aa19.33■□□□□ 0.68
LDLRAD3-203ENST00000528989 CFHR3Q02985 330 aa19.33■□□□□ 0.68
LDLRAD3-203ENST00000528989 LCNL1Q6ZST4 164 aa19.33■□□□□ 0.68
LDLRAD3-203ENST00000528989 C9orf62Q8N4C0 152 aa19.33■□□□□ 0.68
LDLRAD3-203ENST00000528989 BOLA1Q9Y3E2 137 aa19.33■□□□□ 0.68
LDLRAD3-203ENST00000528989 PRSS46E5RG02 174 aa19.32■□□□□ 0.68
LDLRAD3-203ENST00000528989 PVRIGQ6DKI7 326 aa19.32■□□□□ 0.68
LDLRAD3-203ENST00000528989 STX12Q86Y82 276 aa19.32■□□□□ 0.68
LDLRAD3-203ENST00000528989 FNDC4Q9H6D8 234 aaPredicted RBP19.32■□□□□ 0.68
LDLRAD3-203ENST00000528989 IGLV11-55A0A075B6I3 123 aa19.31■□□□□ 0.68
LDLRAD3-203ENST00000528989 OR10P1Q8NGE3 313 aa19.31■□□□□ 0.68
LDLRAD3-203ENST00000528989 OR5C1Q8NGR4 320 aa19.31■□□□□ 0.68
LDLRAD3-203ENST00000528989 LINC01006Q8NI28 216 aa19.31■□□□□ 0.68
LDLRAD3-203ENST00000528989 KLK15Q9H2R5 256 aa19.31■□□□□ 0.68
LDLRAD3-203ENST00000528989 HSPB11Q9Y547 144 aa19.31■□□□□ 0.68
LDLRAD3-203ENST00000528989 OR2J3O76001 311 aa19.31■□□□□ 0.68
LDLRAD3-203ENST00000528989 CLINT1Q14677 625 aa19.31■□□□□ 0.68
LDLRAD3-203ENST00000528989 S4R3C0 116 aa19.31■□□□□ 0.68
LDLRAD3-203ENST00000528989 WFDC1Q9HC57 220 aa19.3■□□□□ 0.68
LDLRAD3-203ENST00000528989 ZNF580Q9UK33 172 aa19.3■□□□□ 0.68
LDLRAD3-203ENST00000528989 OPRK1P41145 380 aa19.29■□□□□ 0.68
LDLRAD3-203ENST00000528989 ATP5IP56385 69 aaPredicted RBP19.29■□□□□ 0.68
LDLRAD3-203ENST00000528989 OR2F1Q13607 317 aa19.29■□□□□ 0.68
LDLRAD3-203ENST00000528989 ARL6Q9H0F7 186 aa19.29■□□□□ 0.68
LDLRAD3-203ENST00000528989 NDUFB8O95169 186 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 IGLV1-40P01703 118 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 BAXQ07812 192 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 SLC38A11Q08AI6 406 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 TMUB2Q71RG4 321 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 CENPVQ7Z7K6 275 aaPredicted RBP19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 KCNRGQ8N5I3 272 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 PPP1R14BQ96C90 147 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 FBXL17Q9UF56 701 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 MT-CO2P00403 227 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 ZNF345Q14585 488 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 RNASEH2CQ8TDP1 164 aaKnown RBP19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 C16orf95Q9H693 158 aa19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 MRPL36Q9P0J6 103 aaKnown RBP19.28■□□□□ 0.68
LDLRAD3-203ENST00000528989 TRBV9A0A0B4J1U6 114 aa19.27■□□□□ 0.68
LDLRAD3-203ENST00000528989 PSMB11A5LHX3 300 aa19.27■□□□□ 0.68
LDLRAD3-203ENST00000528989 I3L2K1 104 aa19.27■□□□□ 0.68
LDLRAD3-203ENST00000528989 K7EIM0 57 aa19.27■□□□□ 0.68
LDLRAD3-203ENST00000528989 RHOGP84095 191 aa19.27■□□□□ 0.68
LDLRAD3-203ENST00000528989 FBXL7Q9UJT9 491 aa19.27■□□□□ 0.68
LDLRAD3-203ENST00000528989 PF4V1P10720 104 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 S100A11P31949 105 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 CD69Q07108 199 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 HIST2H2BDQ6DRA6 164 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 OR1S2Q8NGQ3 325 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 GON7Q9BXV9 100 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 A0A0D9SG52 128 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 IGHG4P01861 327 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 HBG1P69891 147 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 HBG2P69892 147 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 LILRB2Q8N423 598 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 OR1L6Q8NGR2 347 aa19.26■□□□□ 0.67
LDLRAD3-203ENST00000528989 MFSD2BA6NFX1 497 aa19.25■□□□□ 0.67
LDLRAD3-203ENST00000528989 NDUFA7O95182 113 aa19.25■□□□□ 0.67
LDLRAD3-203ENST00000528989 IGHV3-23P01764 117 aa19.25■□□□□ 0.67
LDLRAD3-203ENST00000528989 TRGV3P03979 118 aa19.25■□□□□ 0.67
LDLRAD3-203ENST00000528989 MDKP21741 143 aaPredicted RBP19.25■□□□□ 0.67
LDLRAD3-203ENST00000528989 PSMB8P28062 276 aa19.25■□□□□ 0.67
LDLRAD3-203ENST00000528989 C15orf32Q32M92 178 aa19.25■□□□□ 0.67
LDLRAD3-203ENST00000528989 PRIMA1Q86XR5 153 aa19.25■□□□□ 0.67
LDLRAD3-203ENST00000528989 SCARB1Q8WTV0 552 aa19.25■□□□□ 0.67
LDLRAD3-203ENST00000528989 RAB9AP51151 201 aa19.24■□□□□ 0.67
LDLRAD3-203ENST00000528989 GAMTQ14353 236 aa19.24■□□□□ 0.67
LDLRAD3-203ENST00000528989 KLHDC1Q8N7A1 406 aa19.24■□□□□ 0.67
LDLRAD3-203ENST00000528989 HAX1O00165 279 aa19.24■□□□□ 0.67
LDLRAD3-203ENST00000528989 TPPP2P59282 170 aa19.24■□□□□ 0.67
LDLRAD3-203ENST00000528989 KLK9Q2XQG4 91 aa19.24■□□□□ 0.67
LDLRAD3-203ENST00000528989 SLC16A13Q7RTY0 426 aa19.24■□□□□ 0.67
LDLRAD3-203ENST00000528989 KLK9Q9UKQ9 250 aa19.24■□□□□ 0.67
LDLRAD3-203ENST00000528989 SMCO3A2RU48 225 aa19.23■□□□□ 0.67
LDLRAD3-203ENST00000528989 CORTO00230 105 aa19.23■□□□□ 0.67
LDLRAD3-203ENST00000528989 SLC35B1P78383 322 aa19.23■□□□□ 0.67
LDLRAD3-203ENST00000528989 TEX38Q6PEX7 206 aa19.23■□□□□ 0.67
LDLRAD3-203ENST00000528989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.23■□□□□ 0.67
LDLRAD3-203ENST00000528989 NECAP1Q8NC96 275 aa19.23■□□□□ 0.67
LDLRAD3-203ENST00000528989 CYTL1Q9NRR1 136 aa19.23■□□□□ 0.67
LDLRAD3-203ENST00000528989 THYN1Q9P016 225 aa19.23■□□□□ 0.67
LDLRAD3-203ENST00000528989 HIST1H1BP16401 226 aaKnown RBP19.22■□□□□ 0.67
LDLRAD3-203ENST00000528989 EXOSC2Q13868 293 aaKnown RBP19.22■□□□□ 0.67
LDLRAD3-203ENST00000528989 RPL7L1Q6DKI1 246 aaKnown RBP19.22■□□□□ 0.67
LDLRAD3-203ENST00000528989 OR5AU1Q8NGC0 362 aa19.22■□□□□ 0.67
LDLRAD3-203ENST00000528989 ACY3Q96HD9 319 aa19.22■□□□□ 0.67
LDLRAD3-203ENST00000528989 CYB5BO43169 146 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms