RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 TUBA4BQ9H853 241 aa8.72□□□□□ -1.01
SPIDR-222ENST00000524006 ZNF430Q9H8G1 570 aaPredicted RBP8.72□□□□□ -1.01
SPIDR-222ENST00000524006 METTL1Q9UBP6 276 aaKnown RBP8.72□□□□□ -1.01
SPIDR-222ENST00000524006 SLC45A2Q9UMX9 530 aa8.72□□□□□ -1.01
SPIDR-222ENST00000524006 SRRM4A7MD48 611 aaKnown RBP8.71□□□□□ -1.02
SPIDR-222ENST00000524006 LY6HO94772 140 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 SOD3P08294 240 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 ARL14EPLP0DKL9 152 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 IGFBP2P18065 325 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 S100PP25815 95 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 LGALS4P56470 323 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 UBE2G2P60604 165 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 CD69Q07108 199 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 FAM90A2PQ658T7 463 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 CCDC144NLQ6NUI1 221 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 ZNF841Q6ZN19 808 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 KIR3DL3Q8N743 410 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 CACNG8Q8WXS5 425 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 OR5B12Q96R08 314 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 TMPRSS5Q9H3S3 457 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 BIN3Q9NQY0 253 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 NDUFA4L2Q9NRX3 87 aa8.71□□□□□ -1.02
SPIDR-222ENST00000524006 MAP1AP78559 2803 aaPredicted RBP8.71□□□□□ -1.02
SPIDR-222ENST00000524006 INS-IGF2F8WCM5 200 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 COX7A2P2O60397 106 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 EIF3GO75821 320 aaKnown RBP eCLIP8.7□□□□□ -1.02
SPIDR-222ENST00000524006 GOSR1O95249 250 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 OR10J1P30954 320 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 CDKN1AP38936 164 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 EFNA4P52798 201 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 DIAPH2-AS1Q14236 149 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 HES1Q14469 280 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 TMEM241Q24JQ0 296 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 TPTE2P1Q5T6R2 138 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 SP5Q6BEB4 398 aaPredicted RBP8.7□□□□□ -1.02
SPIDR-222ENST00000524006 CYP2G1PQ6ZSU1 146 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 OR10W1Q8NGF6 305 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 OR1L4Q8NGR5 311 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 TMEM170AQ8WVE7 144 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 HIST1H2BAQ96A08 127 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 ISOC2Q96AB3 205 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 MISP3Q96FF7 219 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 PFDN5Q99471 154 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 RNF5Q99942 180 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 C19orf24Q9BVV8 132 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 MRPL32Q9BYC8 188 aaKnown RBP8.7□□□□□ -1.02
SPIDR-222ENST00000524006 TMEM167BQ9NRX6 74 aa8.7□□□□□ -1.02
SPIDR-222ENST00000524006 TECRQ9NZ01 308 aaKnown RBP8.7□□□□□ -1.02
SPIDR-222ENST00000524006 LSM4Q9Y4Z0 139 aaKnown RBP8.7□□□□□ -1.02
SPIDR-222ENST00000524006 CXorf65A6NEN9 183 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 C22orf46C9J442 243 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 OR7C2O60412 319 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 YIF1AO95070 293 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 CNIH1O95406 144 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 IGLV1-47P01700 117 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 IGLV2-23P01705 113 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 STAG3L2P0CL84 134 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 STAG3L3P0CL85 134 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 FOLR2P14207 255 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 RAB5AP20339 215 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 GCHFRP30047 84 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 ARF6P62330 175 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 PSG5Q15238 335 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 PRSS8Q16651 343 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 TMEM249Q2WGJ8 235 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 RNF212Q495C1 297 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 GCSAMLQ5JQS6 135 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 C10orf55Q5SWW7 151 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 FAM78BQ5VT40 261 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 SPNS3Q6ZMD2 512 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 LY6G5BQ8NDX9 201 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 OR4P4Q8NGL7 312 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 CTDSP1Q9GZU7 261 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 PARLQ9H300 379 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 SAV1Q9H4B6 383 aaPredicted RBP8.69□□□□□ -1.02
SPIDR-222ENST00000524006 DPM3Q9P2X0 92 aa8.69□□□□□ -1.02
SPIDR-222ENST00000524006 A6NNC1 897 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 COLCA2A8K830 154 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 CLDN34H7C241 214 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 CLN5O75503 358 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 REG1AP05451 166 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 CRYBA1P05813 215 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 FABP1P07148 127 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 DEFA4P12838 97 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 COMPP49747 757 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-222ENST00000524006 CD81P60033 236 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 SELENOTP62341 195 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 PRB3Q04118 309 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-222ENST00000524006 GAMTQ14353 236 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 MMDQ15546 238 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 BSXQ3C1V8 233 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 FAM24BQ8N5W8 94 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 SDF2L1Q9HCN8 221 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 FUT9Q9Y231 359 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 ZNF469Q96JG9 3925 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-222ENST00000524006 ABCA4P78363 2273 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 NAV3Q8IVL0 2385 aa8.68□□□□□ -1.02
SPIDR-222ENST00000524006 NIPBLQ6KC79 2804 aaeCLIP8.67□□□□□ -1.025e-6■■■■■ 32.2
SPIDR-222ENST00000524006 MDFIC2A0A1B0GVS7 189 aa8.67□□□□□ -1.02
SPIDR-222ENST00000524006 A0A1W2PPI3 338 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms