RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 G3V3Q6 166 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 AIPO00170 330 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 HMGB3O15347 200 aaKnown RBP2.1□□□□□ -2.07
SQLE-204ENST00000520493 GNRH2O43555 120 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 IGKV1-17P01599 117 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 LGALS1P09382 135 aaKnown RBP2.1□□□□□ -2.07
SQLE-204ENST00000520493 ZNF728P0DKX0 622 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 GABRA4P48169 554 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 PYDC2Q56P42 97 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 DYNAPQ8N1N2 210 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 TMEM70Q9BUB7 260 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 PSORS1C2Q9UIG4 136 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 CYSLTR1Q9Y271 337 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 TONSLQ96HA7 1378 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 HECW1Q76N89 1606 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 FMN1Q68DA7 1419 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 COL6A5A8TX70 2615 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 EYSQ5T1H1 3165 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 KIAA1109Q2LD37 5005 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 TRGV5A0A0B4J1U4 118 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 MDFIC2A0A1B0GVS7 189 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 SIGLEC16A6NMB1 481 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 FABP5P3A8MUU1 101 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 C19orf84I3L1E1 186 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 NDUFC2O95298 119 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 IFNA7P01567 189 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 IGLV6-57P01721 117 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 IDO1P14902 403 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 PSMB8P28062 276 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 PHBP35232 272 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 EMP1P54849 157 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 TNFRSF9Q07011 255 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 SPANXN3Q5MJ09 141 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 MSRB3Q8IXL7 192 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 STX19Q8N4C7 294 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 SLC25A40Q8TBP6 338 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 CHST6Q9GZX3 395 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 MIXL1Q9H2W2 232 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 ACER3Q9NUN7 267 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 TP73-AS1Q9UF72 201 aa2.09□□□□□ -2.07
SQLE-204ENST00000520493 UTRNP46939 3433 aa2.09□□□□□ -2.08
SQLE-204ENST00000520493 PTPRSQ13332 1948 aa2.09□□□□□ -2.08
SQLE-204ENST00000520493 SHROOM3Q8TF72 1996 aa2.09□□□□□ -2.08
SQLE-204ENST00000520493 SCN10AQ9Y5Y9 1956 aa2.09□□□□□ -2.08
SQLE-204ENST00000520493 ZSWIM8A7E2V4 1837 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 SLX4Q8IY92 1834 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 NACADO15069 1562 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 IGKV2-24A0A0C4DH68 120 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 C11orf86A6NJI1 115 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 H7C1C5 153 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 OR2J2O76002 312 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 IFNA21P01568 189 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 IGHV3-7P01780 117 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 MSMBP08118 114 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 SMIM17P0DL12 118 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 MSNP26038 577 aaKnown RBP2.08□□□□□ -2.08
SQLE-204ENST00000520493 HLA-DMBP28068 263 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 NCALDP61601 193 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 LCN6P62502 163 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 RHOBP62745 196 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 MEF2BQ02080 365 aaPredicted RBP2.08□□□□□ -2.08
SQLE-204ENST00000520493 ZNF705AQ6ZN79 300 aaPredicted RBP2.08□□□□□ -2.08
SQLE-204ENST00000520493 LHFPL1Q86WI0 220 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 OR4C16Q8NGL9 310 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 TEX47Q8TBZ9 253 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 RASSF5Q8WWW0 418 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 FGF13Q92913 245 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 TVP23CQ96ET8 276 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 GPER1Q99527 375 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 OR8D2Q9GZM6 311 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 IMUPQ9GZP8 106 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 SSR3Q9UNL2 185 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 RBM7Q9Y580 266 aaKnown RBP2.08□□□□□ -2.08
SQLE-204ENST00000520493 MINOS1-NBL1R4GNA1 71 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 MYH2Q9UKX2 1941 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 CELSR3Q9NYQ7 3312 aa2.08□□□□□ -2.08
SQLE-204ENST00000520493 MYH3P11055 1940 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 ZCCHC11Q5TAX3 1644 aaKnown RBP2.07□□□□□ -2.08
SQLE-204ENST00000520493 A0A0J9YX75 114 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 VPS37CA5D8V6 355 aaPredicted RBP2.07□□□□□ -2.08
SQLE-204ENST00000520493 GGT3PA6NGU5 568 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 GPR31O00270 319 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 MFSD11O43934 449 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 CREBL2O60519 120 aaPredicted RBP2.07□□□□□ -2.08
SQLE-204ENST00000520493 RPSAP08865 295 aaKnown RBP2.07□□□□□ -2.08
SQLE-204ENST00000520493 TFPTP0C1Z6 253 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 RPS4Y1P22090 263 aaKnown RBP2.07□□□□□ -2.08
SQLE-204ENST00000520493 NFYAP23511 347 aaPredicted RBP2.07□□□□□ -2.08
SQLE-204ENST00000520493 CASP1P29466 404 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 ATP5G3P48201 142 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 TPI1P60174 286 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 GNG5P63218 68 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 BAMBIQ13145 260 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 SCGB2B2Q4G0G5 96 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 PABPC1L2AQ5JQF8 200 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 LYRM7Q5U5X0 104 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 LYZL1Q6UWQ5 148 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 PHF13Q86YI8 300 aaPredicted RBP2.07□□□□□ -2.08
SQLE-204ENST00000520493 ZNF439Q8NDP4 499 aa2.07□□□□□ -2.08
SQLE-204ENST00000520493 PYDC1Q8WXC3 89 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms