RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 LY86O95711 162 aa13.74□□□□□ -0.21
CLDND1-220ENST00000508902 MT-CO2P00403 227 aa13.74□□□□□ -0.21
CLDND1-220ENST00000508902 PPP1R1AQ13522 171 aa13.74□□□□□ -0.21
CLDND1-220ENST00000508902 FAM219AQ8IW50 185 aa13.74□□□□□ -0.21
CLDND1-220ENST00000508902 MISP3Q96FF7 219 aa13.74□□□□□ -0.21
CLDND1-220ENST00000508902 THYN1Q9P016 225 aa13.74□□□□□ -0.21
CLDND1-220ENST00000508902 DNAH7Q8WXX0 4024 aa13.73□□□□□ -0.21
CLDND1-220ENST00000508902 ATG12O94817 140 aa13.73□□□□□ -0.21
CLDND1-220ENST00000508902 IFNA17P01571 189 aa13.73□□□□□ -0.21
CLDND1-220ENST00000508902 TM4SF20Q53R12 229 aa13.73□□□□□ -0.21
CLDND1-220ENST00000508902 TRIQKQ629K1 86 aa13.73□□□□□ -0.21
CLDND1-220ENST00000508902 RNASE11Q8TAA1 199 aaKnown RBP13.73□□□□□ -0.21
CLDND1-220ENST00000508902 SCGB3A2Q96PL1 93 aa13.73□□□□□ -0.21
CLDND1-220ENST00000508902 B9D2Q9BPU9 175 aa13.73□□□□□ -0.21
CLDND1-220ENST00000508902 SLC25A21Q9BQT8 299 aaPredicted RBP13.73□□□□□ -0.21
CLDND1-220ENST00000508902 FNDC4Q9H6D8 234 aaPredicted RBP13.73□□□□□ -0.21
CLDND1-220ENST00000508902 A0A0B4J2A0 478 aa13.72□□□□□ -0.21
CLDND1-220ENST00000508902 CTSGP08311 255 aa13.72□□□□□ -0.21
CLDND1-220ENST00000508902 FOLR2P14207 255 aa13.72□□□□□ -0.21
CLDND1-220ENST00000508902 HOXA1P49639 335 aaPredicted RBP13.72□□□□□ -0.21
CLDND1-220ENST00000508902 CD300EQ496F6 205 aaPredicted RBP13.72□□□□□ -0.21
CLDND1-220ENST00000508902 OR52E5Q8NH55 327 aa13.72□□□□□ -0.21
CLDND1-220ENST00000508902 TMEM190Q8WZ59 177 aa13.72□□□□□ -0.21
CLDND1-220ENST00000508902 ZMAT5Q9UDW3 170 aaKnown RBP13.72□□□□□ -0.21
CLDND1-220ENST00000508902 MLXQ9UH92 298 aa13.72□□□□□ -0.21
CLDND1-220ENST00000508902 SHPKQ9UHJ6 478 aa13.72□□□□□ -0.21
CLDND1-220ENST00000508902 IGHV3OR16-8A0A075B7F1 116 aa13.71□□□□□ -0.21
CLDND1-220ENST00000508902 NDUFB6O95139 128 aa13.71□□□□□ -0.21
CLDND1-220ENST00000508902 SPCS3P61009 180 aa13.71□□□□□ -0.21
CLDND1-220ENST00000508902 MLANAQ16655 118 aa13.71□□□□□ -0.21
CLDND1-220ENST00000508902 DEFB114Q30KQ6 69 aa13.71□□□□□ -0.21
CLDND1-220ENST00000508902 TMEM128Q5BJH2 165 aa13.71□□□□□ -0.21
CLDND1-220ENST00000508902 PLET1Q6UQ28 207 aa13.71□□□□□ -0.21
CLDND1-220ENST00000508902 BSCL2Q96G97 398 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-220ENST00000508902 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-220ENST00000508902 PEMTQ9UBM1 199 aa13.71□□□□□ -0.21
CLDND1-220ENST00000508902 KCNIP3Q9Y2W7 256 aa13.71□□□□□ -0.21
CLDND1-220ENST00000508902 ZNF785A8K8V0 405 aa13.7□□□□□ -0.22
CLDND1-220ENST00000508902 SFT2D2O95562 160 aa13.7□□□□□ -0.22
CLDND1-220ENST00000508902 CBLN1P23435 193 aa13.7□□□□□ -0.22
CLDND1-220ENST00000508902 FCGR2BP31994 310 aaPredicted RBP13.7□□□□□ -0.22
CLDND1-220ENST00000508902 ERHP84090 104 aaKnown RBP13.7□□□□□ -0.22
CLDND1-220ENST00000508902 RBMS2Q15434 407 aaKnown RBP13.7□□□□□ -0.22
CLDND1-220ENST00000508902 TATDN3Q17R31 274 aa13.7□□□□□ -0.22
CLDND1-220ENST00000508902 LGI3Q8N145 548 aa13.7□□□□□ -0.22
CLDND1-220ENST00000508902 LRTM2Q8N967 370 aa13.7□□□□□ -0.22
CLDND1-220ENST00000508902 UBAC2Q8NBM4 344 aa13.7□□□□□ -0.22
CLDND1-220ENST00000508902 OR1L6Q8NGR2 347 aa13.7□□□□□ -0.22
CLDND1-220ENST00000508902 PINX1Q96BK5 328 aaKnown RBP13.7□□□□□ -0.22
CLDND1-220ENST00000508902 ATP6V0BQ99437 205 aa13.7□□□□□ -0.22
CLDND1-220ENST00000508902 ZNF320A2RRD8 509 aa13.69□□□□□ -0.22
CLDND1-220ENST00000508902 CYB5BO43169 146 aa13.69□□□□□ -0.22
CLDND1-220ENST00000508902 PITX3O75364 302 aa13.69□□□□□ -0.22
CLDND1-220ENST00000508902 C8orf88P0DMB2 117 aa13.69□□□□□ -0.22
CLDND1-220ENST00000508902 SULT1A3P0DMM9 295 aa13.69□□□□□ -0.22
CLDND1-220ENST00000508902 SULT1A4P0DMN0 295 aa13.69□□□□□ -0.22
CLDND1-220ENST00000508902 VAMP1P23763 118 aa13.69□□□□□ -0.22
CLDND1-220ENST00000508902 Q56UQ5 140 aa13.69□□□□□ -0.22
CLDND1-220ENST00000508902 CENPSQ8N2Z9 138 aa13.69□□□□□ -0.22
CLDND1-220ENST00000508902 HSPB7Q9UBY9 170 aa13.69□□□□□ -0.22
CLDND1-220ENST00000508902 NAP1L6A6NFF2 107 aa13.68□□□□□ -0.22
CLDND1-220ENST00000508902 TNFRSF9Q07011 255 aa13.68□□□□□ -0.22
CLDND1-220ENST00000508902 UXS1Q8NBZ7 420 aa13.68□□□□□ -0.22
CLDND1-220ENST00000508902 WDR89Q96FK6 387 aaPredicted RBP13.68□□□□□ -0.22
CLDND1-220ENST00000508902 ASCL2Q99929 193 aa13.68□□□□□ -0.22
CLDND1-220ENST00000508902 PDCD10Q9BUL8 212 aa13.68□□□□□ -0.22
CLDND1-220ENST00000508902 ANXA7P20073 488 aaKnown RBP13.67□□□□□ -0.22
CLDND1-220ENST00000508902 MFAP4P55083 255 aa13.67□□□□□ -0.22
CLDND1-220ENST00000508902 SMCO1Q147U7 214 aa13.67□□□□□ -0.22
CLDND1-220ENST00000508902 FAM106AQ4KMX7 169 aa13.67□□□□□ -0.22
CLDND1-220ENST00000508902 SPSB3Q6PJ21 355 aa13.67□□□□□ -0.22
CLDND1-220ENST00000508902 BTNL8Q6UX41 500 aa13.67□□□□□ -0.22
CLDND1-220ENST00000508902 TMEM61Q8N0U2 210 aa13.67□□□□□ -0.22
CLDND1-220ENST00000508902 WFDC10AQ9H1F0 79 aa13.67□□□□□ -0.22
CLDND1-220ENST00000508902 RBKSQ9H477 322 aa13.67□□□□□ -0.22
CLDND1-220ENST00000508902 SMAD5-AS1Q9Y6J3 95 aa13.67□□□□□ -0.22
CLDND1-220ENST00000508902 NBEAL2Q6ZNJ1 2754 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 C9orf170A2RU37 121 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 MPTX1A8MV57 137 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 NDUFA4O00483 81 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 ZNF207O43670 478 aaKnown RBP13.66□□□□□ -0.22
CLDND1-220ENST00000508902 FRMD6-AS1P0C7T7 363 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 ANXA3P12429 323 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 SNCAP37840 140 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 SRPXP78539 464 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 LCN12Q6JVE5 192 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 OR2K2Q8NGT1 345 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 C7orf50Q9BRJ6 194 aaKnown RBP13.66□□□□□ -0.22
CLDND1-220ENST00000508902 TBC1D24Q9ULP9 559 aa13.66□□□□□ -0.22
CLDND1-220ENST00000508902 CEBPZOSA8MTT3 80 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 ADAP1O75689 374 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 CD7P09564 240 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 IGHV4-30-4P0DP06 118 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 INPP1P49441 399 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 CD69Q07108 199 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 C2orf83Q53S99 150 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 SBSPONQ8IVN8 264 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 SLC24A4Q8NFF2 622 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 DYNLRB2Q8TF09 96 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 TXN2Q99757 166 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 573.9 ms