RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 SBSPONQ8IVN8 264 aa11.41□□□□□ -0.58
CLDND1-215ENST00000507874 FAM219AQ8IW50 185 aa11.41□□□□□ -0.58
CLDND1-215ENST00000507874 SRRQ9GZT4 340 aa11.41□□□□□ -0.58
CLDND1-215ENST00000507874 KCNIP3Q9Y2W7 256 aa11.41□□□□□ -0.58
CLDND1-215ENST00000507874 TMEM56-RWDD3S4R434 201 aa11.41□□□□□ -0.58
CLDND1-215ENST00000507874 ZNF785A8K8V0 405 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 MT-CO2P00403 227 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 IGHV3-48P01763 117 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 AKR1C4P17516 323 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 HOXA1P49639 335 aaPredicted RBP11.4□□□□□ -0.59
CLDND1-215ENST00000507874 SPSB3Q6PJ21 355 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 UXS1Q8NBZ7 420 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 TMEM190Q8WZ59 177 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 PINX1Q96BK5 328 aaKnown RBP11.4□□□□□ -0.59
CLDND1-215ENST00000507874 ZNF414Q96IQ9 312 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 PALMDQ9NP74 551 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 TECRQ9NZ01 308 aaKnown RBP11.4□□□□□ -0.59
CLDND1-215ENST00000507874 CACNG5Q9UF02 275 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 MLXQ9UH92 298 aa11.4□□□□□ -0.59
CLDND1-215ENST00000507874 C8orf88P0DMB2 117 aa11.39□□□□□ -0.59
CLDND1-215ENST00000507874 RNASE2P10153 161 aaKnown RBP11.39□□□□□ -0.59
CLDND1-215ENST00000507874 SNCAP37840 140 aa11.39□□□□□ -0.59
CLDND1-215ENST00000507874 MFAP4P55083 255 aa11.39□□□□□ -0.59
CLDND1-215ENST00000507874 ELLP55199 621 aaPredicted RBP11.39□□□□□ -0.59
CLDND1-215ENST00000507874 AARDQ4LEZ3 155 aa11.39□□□□□ -0.59
CLDND1-215ENST00000507874 IL22RA2Q969J5 263 aa11.39□□□□□ -0.59
CLDND1-215ENST00000507874 WDR89Q96FK6 387 aaPredicted RBP11.39□□□□□ -0.59
CLDND1-215ENST00000507874 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.39□□□□□ -0.59
CLDND1-215ENST00000507874 C19orf73Q9NVV2 129 aa11.39□□□□□ -0.59
CLDND1-215ENST00000507874 UFC1Q9Y3C8 167 aa11.39□□□□□ -0.59
CLDND1-215ENST00000507874 DNAH9Q9NYC9 4486 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 IGHV3OR16-8A0A075B7F1 116 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 A8MZ25 164 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 NDUFA4O00483 81 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 CTSGP08311 255 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 FCGR2BP31994 310 aaPredicted RBP11.38□□□□□ -0.59
CLDND1-215ENST00000507874 SPCS3P61009 180 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 BAK1Q16611 211 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 ZNF57Q68EA5 555 aaPredicted RBP11.38□□□□□ -0.59
CLDND1-215ENST00000507874 PVRIGQ6DKI7 326 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 BTNL8Q6UX41 500 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 GTSCR1Q86UQ5 136 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 TMEM61Q8N0U2 210 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 OR52E5Q8NH55 327 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 DEDD2Q8WXF8 326 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 MARC2Q969Z3 335 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 TXN2Q99757 166 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 ENY2Q9NPA8 101 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 NDUFA13Q9P0J0 144 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 MRPL27Q9P0M9 148 aaKnown RBP11.38□□□□□ -0.59
CLDND1-215ENST00000507874 U3KQK5 164 aa11.38□□□□□ -0.59
CLDND1-215ENST00000507874 CD7P09564 240 aa11.37□□□□□ -0.59
CLDND1-215ENST00000507874 CD81P60033 236 aa11.37□□□□□ -0.59
CLDND1-215ENST00000507874 GUCA2BQ16661 112 aa11.37□□□□□ -0.59
CLDND1-215ENST00000507874 TMED4Q7Z7H5 227 aa11.37□□□□□ -0.59
CLDND1-215ENST00000507874 SDHCQ99643 169 aaPredicted RBP11.37□□□□□ -0.59
CLDND1-215ENST00000507874 GAR1Q9NY12 217 aaKnown RBP11.37□□□□□ -0.59
CLDND1-215ENST00000507874 NUPL2O15504 423 aaKnown RBP11.36□□□□□ -0.59
CLDND1-215ENST00000507874 NXPH3O95157 252 aa11.36□□□□□ -0.59
CLDND1-215ENST00000507874 SUB1P53999 127 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLDND1-215ENST00000507874 BSXQ3C1V8 233 aa11.36□□□□□ -0.59
CLDND1-215ENST00000507874 LYZL2Q7Z4W2 148 aa11.36□□□□□ -0.59
CLDND1-215ENST00000507874 LGI3Q8N145 548 aa11.36□□□□□ -0.59
CLDND1-215ENST00000507874 SLC25A21Q9BQT8 299 aaPredicted RBP11.36□□□□□ -0.59
CLDND1-215ENST00000507874 NEURL2Q9BR09 285 aa11.36□□□□□ -0.59
CLDND1-215ENST00000507874 C20orf24Q9BUV8 137 aa11.36□□□□□ -0.59
CLDND1-215ENST00000507874 DAZ1Q9NQZ3 744 aaKnown RBP11.36□□□□□ -0.59
CLDND1-215ENST00000507874 A0A0B4J2A0 478 aa11.35□□□□□ -0.59
CLDND1-215ENST00000507874 CORTO00230 105 aa11.35□□□□□ -0.59
CLDND1-215ENST00000507874 ZNF207O43670 478 aaKnown RBP11.35□□□□□ -0.59
CLDND1-215ENST00000507874 GNG7O60262 68 aa11.35□□□□□ -0.59
CLDND1-215ENST00000507874 SCAF4O95104 1147 aaKnown RBP11.35□□□□□ -0.59
CLDND1-215ENST00000507874 SULT1A3P0DMM9 295 aa11.35□□□□□ -0.59
CLDND1-215ENST00000507874 SULT1A4P0DMN0 295 aa11.35□□□□□ -0.59
CLDND1-215ENST00000507874 ANXA3P12429 323 aa11.35□□□□□ -0.59
CLDND1-215ENST00000507874 TMEM128Q5BJH2 165 aa11.35□□□□□ -0.59
CLDND1-215ENST00000507874 NMSQ5H8A3 153 aa11.35□□□□□ -0.59
CLDND1-215ENST00000507874 FNDC4Q9H6D8 234 aaPredicted RBP11.35□□□□□ -0.59
CLDND1-215ENST00000507874 SHPKQ9UHJ6 478 aa11.35□□□□□ -0.59
CLDND1-215ENST00000507874 COL7A1Q02388 2944 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 CEBPZOSA8MTT3 80 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 K7EMT4 169 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 CCR6P51684 374 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 SRPXP78539 464 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 RELQ04864 619 aaPredicted RBP11.34□□□□□ -0.59
CLDND1-215ENST00000507874 MLANAQ16655 118 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 TRIQKQ629K1 86 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 DUSP18Q8NEJ0 188 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 WWC2-AS2Q96NR7 200 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 WFDC10AQ9H1F0 79 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 TUBA4BQ9H853 241 aa11.34□□□□□ -0.59
CLDND1-215ENST00000507874 HEYLQ9NQ87 328 aaPredicted RBP11.34□□□□□ -0.59
CLDND1-215ENST00000507874 MRPL36Q9P0J6 103 aaKnown RBP11.34□□□□□ -0.59
CLDND1-215ENST00000507874 C15orf62A8K5M9 175 aa11.33□□□□□ -0.6
CLDND1-215ENST00000507874 VAMP1P23763 118 aa11.33□□□□□ -0.6
CLDND1-215ENST00000507874 OPRK1P41145 380 aa11.33□□□□□ -0.6
CLDND1-215ENST00000507874 HTR2BP41595 481 aa11.33□□□□□ -0.6
CLDND1-215ENST00000507874 NPBWR1P48145 328 aa11.33□□□□□ -0.6
CLDND1-215ENST00000507874 INPP1P49441 399 aa11.33□□□□□ -0.6
CLDND1-215ENST00000507874 RBMS2Q15434 407 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms