RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 CACNG5Q9UF02 275 aa13.19□□□□□ -0.3
CLDND1-209ENST00000503621 MFSD2BA6NFX1 497 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 CLEC3BP05452 202 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 SNCAP37840 140 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 HTR2BP41595 481 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 PPP1R1AQ13522 171 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 IZUMO4Q1ZYL8 232 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 FAM106AQ4KMX7 169 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 TMED4Q7Z7H5 227 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 SCARB1Q8WTV0 552 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 OR4C12Q96R67 309 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 C21orf62Q9NYP8 219 aa13.18□□□□□ -0.3
CLDND1-209ENST00000503621 F8W735 103 aaPredicted RBP13.17□□□□□ -0.3
CLDND1-209ENST00000503621 RNASE2P10153 161 aaKnown RBP13.17□□□□□ -0.3
CLDND1-209ENST00000503621 ARL3P36405 182 aa13.17□□□□□ -0.3
CLDND1-209ENST00000503621 ASAH1Q13510 395 aa13.17□□□□□ -0.3
CLDND1-209ENST00000503621 ZNF846Q147U1 533 aa13.17□□□□□ -0.3
CLDND1-209ENST00000503621 C2orf83Q53S99 150 aa13.17□□□□□ -0.3
CLDND1-209ENST00000503621 C19orf35Q6ZS72 473 aa13.17□□□□□ -0.3
CLDND1-209ENST00000503621 LYZL2Q7Z4W2 148 aa13.17□□□□□ -0.3
CLDND1-209ENST00000503621 ENY2Q9NPA8 101 aa13.17□□□□□ -0.3
CLDND1-209ENST00000503621 U3KQ87 197 aa13.17□□□□□ -0.3
CLDND1-209ENST00000503621 C9orf170A2RU37 121 aa13.16□□□□□ -0.3
CLDND1-209ENST00000503621 TGOLN2O43493 480 aa13.16□□□□□ -0.3
CLDND1-209ENST00000503621 OR4E1P0C645 316 aa13.16□□□□□ -0.3
CLDND1-209ENST00000503621 SYNJ2BPP57105 145 aa13.16□□□□□ -0.3
CLDND1-209ENST00000503621 TNFRSF9Q07011 255 aa13.16□□□□□ -0.3
CLDND1-209ENST00000503621 ANKRD55Q3KP44 614 aa13.16□□□□□ -0.3
CLDND1-209ENST00000503621 CLEC19AQ6UXS0 136 aa13.16□□□□□ -0.3
CLDND1-209ENST00000503621 LYG2Q86SG7 212 aa13.16□□□□□ -0.3
CLDND1-209ENST00000503621 RNASEH2CQ8TDP1 164 aaKnown RBP13.16□□□□□ -0.3
CLDND1-209ENST00000503621 MARC2Q969Z3 335 aa13.16□□□□□ -0.3
CLDND1-209ENST00000503621 PALMDQ9NP74 551 aa13.16□□□□□ -0.3
CLDND1-209ENST00000503621 TECRQ9NZ01 308 aaKnown RBP13.16□□□□□ -0.3
CLDND1-209ENST00000503621 SAP30O75446 220 aa13.15□□□□□ -0.3
CLDND1-209ENST00000503621 CSN3P07498 182 aa13.15□□□□□ -0.3
CLDND1-209ENST00000503621 C8orf88P0DMB2 117 aa13.15□□□□□ -0.3
CLDND1-209ENST00000503621 VAMP1P23763 118 aa13.15□□□□□ -0.3
CLDND1-209ENST00000503621 MFAP4P55083 255 aa13.15□□□□□ -0.3
CLDND1-209ENST00000503621 DEFA5Q01523 94 aa13.15□□□□□ -0.3
CLDND1-209ENST00000503621 DHRS2Q13268 280 aa13.15□□□□□ -0.3
CLDND1-209ENST00000503621 ZNF256Q9Y2P7 627 aaPredicted RBP13.15□□□□□ -0.3
CLDND1-209ENST00000503621 K7EMT4 169 aa13.14□□□□□ -0.31
CLDND1-209ENST00000503621 NDUFA4O00483 81 aa13.14□□□□□ -0.31
CLDND1-209ENST00000503621 UPK1BO75841 260 aa13.14□□□□□ -0.31
CLDND1-209ENST00000503621 TCRBP04435 133 aa13.14□□□□□ -0.31
CLDND1-209ENST00000503621 MZT2BQ6NZ67 158 aa13.14□□□□□ -0.31
CLDND1-209ENST00000503621 PLET1Q6UQ28 207 aa13.14□□□□□ -0.31
CLDND1-209ENST00000503621 COQ8AQ8NI60 647 aa13.14□□□□□ -0.31
CLDND1-209ENST00000503621 MITD1Q8WV92 249 aa13.14□□□□□ -0.31
CLDND1-209ENST00000503621 HIPK2Q9H2X6 1198 aa13.14□□□□□ -0.31
CLDND1-209ENST00000503621 PPP5D1E7EU14 171 aa13.13□□□□□ -0.31
CLDND1-209ENST00000503621 MED6O75586 246 aa13.13□□□□□ -0.31
CLDND1-209ENST00000503621 CTSGP08311 255 aa13.13□□□□□ -0.31
CLDND1-209ENST00000503621 NPBWR1P48145 328 aa13.13□□□□□ -0.31
CLDND1-209ENST00000503621 HOXA1P49639 335 aaPredicted RBP13.13□□□□□ -0.31
CLDND1-209ENST00000503621 RELQ04864 619 aaPredicted RBP13.13□□□□□ -0.31
CLDND1-209ENST00000503621 ZC4H2Q9NQZ6 224 aa13.13□□□□□ -0.31
CLDND1-209ENST00000503621 LSM4Q9Y4Z0 139 aaKnown RBP13.13□□□□□ -0.31
CLDND1-209ENST00000503621 RPS10-NUDT3A0A1W2PQS6 291 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 C2orf70A6NJV1 201 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 K7EIL1 84 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 OR2C1O95371 312 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 MT-CO2P00403 227 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 SLC25A4P12235 298 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 GPR183P32249 361 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 ADMP35318 185 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 TMEM116Q8NCL8 245 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 DUSP18Q8NEJ0 188 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 OR4X1Q8NH49 305 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 OR10C1Q96KK4 312 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 CIB3Q96Q77 187 aaPredicted RBP13.12□□□□□ -0.31
CLDND1-209ENST00000503621 C20orf85Q9H1P6 137 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 MRPL27Q9P0M9 148 aaKnown RBP13.12□□□□□ -0.31
CLDND1-209ENST00000503621 TBC1D24Q9ULP9 559 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 UFC1Q9Y3C8 167 aa13.12□□□□□ -0.31
CLDND1-209ENST00000503621 TRAV30A0A087WSZ9 112 aa13.11□□□□□ -0.31
CLDND1-209ENST00000503621 C15orf62A8K5M9 175 aa13.11□□□□□ -0.31
CLDND1-209ENST00000503621 NUPL2O15504 423 aaKnown RBP13.11□□□□□ -0.31
CLDND1-209ENST00000503621 ID3Q02535 119 aa13.11□□□□□ -0.31
CLDND1-209ENST00000503621 ETFRF1Q6IPR1 90 aa13.11□□□□□ -0.31
CLDND1-209ENST00000503621 LCN12Q6JVE5 192 aa13.11□□□□□ -0.31
CLDND1-209ENST00000503621 HEYLQ9NQ87 328 aaPredicted RBP13.11□□□□□ -0.31
CLDND1-209ENST00000503621 FLVCR2Q9UPI3 526 aa13.11□□□□□ -0.31
CLDND1-209ENST00000503621 PRKDCP78527 4128 aaKnown RBP13.1□□□□□ -0.31
CLDND1-209ENST00000503621 TRAV25A0A0B4J276 109 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 WI2-2373I1.2A0A1W2PRP0 233 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 TMEM213A2RRL7 107 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 CEBPZOSA8MTT3 80 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 A8MZ25 164 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 SCGB2A1O75556 95 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 ADAMTSL5Q6ZMM2 481 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 MRAPQ8TCY5 172 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 DTD1Q8TEA8 209 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 CACNG8Q8WXS5 425 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 MISP3Q96FF7 219 aa13.1□□□□□ -0.31
CLDND1-209ENST00000503621 DAZ1Q9NQZ3 744 aaKnown RBP13.1□□□□□ -0.31
CLDND1-209ENST00000503621 PRR13Q9NZ81 148 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms