RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 SUB1P53999 127 aaKnown RBP eCLIP12.68□□□□□ -0.38
ABCF3-218ENST00000498136 SUPT4H1P63272 117 aaKnown RBP12.68□□□□□ -0.38
ABCF3-218ENST00000498136 SPSB3Q6PJ21 355 aa12.68□□□□□ -0.38
ABCF3-218ENST00000498136 LGI3Q8N145 548 aa12.68□□□□□ -0.38
ABCF3-218ENST00000498136 CACNG8Q8WXS5 425 aa12.68□□□□□ -0.38
ABCF3-218ENST00000498136 IZUMO1RA6ND01 250 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 NXPH3O95157 252 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 IGHV3-48P01763 117 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 SULT1A3P0DMM9 295 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 SULT1A4P0DMN0 295 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 MFAP4P55083 255 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 SPCS3P61009 180 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 SRPXP78539 464 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 RBMS2Q15434 407 aaKnown RBP12.67□□□□□ -0.38
ABCF3-218ENST00000498136 CD300EQ496F6 205 aaPredicted RBP12.67□□□□□ -0.38
ABCF3-218ENST00000498136 TMEM128Q5BJH2 165 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 UNQ9165/PRO28630Q6UXU0 137 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 ADAMTSL5Q6ZMM2 481 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 GTSCR1Q86UQ5 136 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 OR2K2Q8NGT1 345 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 ATP6V0BQ99437 205 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 UFC1Q9Y3C8 167 aa12.67□□□□□ -0.38
ABCF3-218ENST00000498136 NAP1L6A6NFF2 107 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 CENPXA8MT69 81 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 CEBPZOSA8MTT3 80 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 A8MWP6 167 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 INS-IGF2F8WCM5 200 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 I3L2K1 104 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 NUPL2O15504 423 aaKnown RBP12.66□□□□□ -0.38
ABCF3-218ENST00000498136 CBLN1P23435 193 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 CCR6P51684 374 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 TM4SF20Q53R12 229 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 LYZL2Q7Z4W2 148 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 OR52E5Q8NH55 327 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 ASCL2Q99929 193 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 CHRDL1Q9BU40 450 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 HEYLQ9NQ87 328 aaPredicted RBP12.66□□□□□ -0.38
ABCF3-218ENST00000498136 GAR1Q9NY12 217 aaKnown RBP12.66□□□□□ -0.38
ABCF3-218ENST00000498136 SELENOKQ9Y6D0 94 aa12.66□□□□□ -0.38
ABCF3-218ENST00000498136 A0A0B4J2A0 478 aa12.65□□□□□ -0.38
ABCF3-218ENST00000498136 PIGBOS1A0A0B4J2F0 54 aa12.65□□□□□ -0.38
ABCF3-218ENST00000498136 TMEM213A2RRL7 107 aa12.65□□□□□ -0.38
ABCF3-218ENST00000498136 F8W735 103 aaPredicted RBP12.65□□□□□ -0.38
ABCF3-218ENST00000498136 CORTO00230 105 aa12.65□□□□□ -0.38
ABCF3-218ENST00000498136 GNG7O60262 68 aa12.65□□□□□ -0.38
ABCF3-218ENST00000498136 RNASE2P10153 161 aaKnown RBP12.65□□□□□ -0.38
ABCF3-218ENST00000498136 GUCA2BQ16661 112 aa12.65□□□□□ -0.38
ABCF3-218ENST00000498136 DEFB114Q30KQ6 69 aa12.65□□□□□ -0.38
ABCF3-218ENST00000498136 UXS1Q8NBZ7 420 aa12.65□□□□□ -0.38
ABCF3-218ENST00000498136 SDHCQ99643 169 aaPredicted RBP12.65□□□□□ -0.38
ABCF3-218ENST00000498136 C20orf24Q9BUV8 137 aa12.65□□□□□ -0.38
ABCF3-218ENST00000498136 ZNF436Q9C0F3 470 aaPredicted RBP12.65□□□□□ -0.38
ABCF3-218ENST00000498136 TECRQ9NZ01 308 aaKnown RBP12.65□□□□□ -0.38
ABCF3-218ENST00000498136 SHPKQ9UHJ6 478 aa12.65□□□□□ -0.38
ABCF3-218ENST00000498136 NDUFA4O00483 81 aa12.64□□□□□ -0.39
ABCF3-218ENST00000498136 IL7P13232 177 aa12.64□□□□□ -0.39
ABCF3-218ENST00000498136 RELQ04864 619 aaPredicted RBP12.64□□□□□ -0.39
ABCF3-218ENST00000498136 SMCO1Q147U7 214 aa12.64□□□□□ -0.39
ABCF3-218ENST00000498136 DUSP18Q8NEJ0 188 aa12.64□□□□□ -0.39
ABCF3-218ENST00000498136 TMEM190Q8WZ59 177 aa12.64□□□□□ -0.39
ABCF3-218ENST00000498136 TXN2Q99757 166 aa12.64□□□□□ -0.39
ABCF3-218ENST00000498136 CACFD1Q9UGQ2 172 aa12.64□□□□□ -0.39
ABCF3-218ENST00000498136 IGHV3OR16-8A0A075B7F1 116 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 YIF1AO95070 293 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 CTSGP08311 255 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 ADMP35318 185 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 OPRK1P41145 380 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 HTR2BP41595 481 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 NPBWR1P48145 328 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 ELLP55199 621 aaPredicted RBP12.63□□□□□ -0.39
ABCF3-218ENST00000498136 PPP1R1AQ13522 171 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 AARDQ4LEZ3 155 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 C11orf87Q6NUJ2 197 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 BTNL8Q6UX41 500 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 OR1S1Q8NH92 325 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 MARC2Q969Z3 335 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 WDR89Q96FK6 387 aaPredicted RBP12.63□□□□□ -0.39
ABCF3-218ENST00000498136 HIPK2Q9H2X6 1198 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 MRPL27Q9P0M9 148 aaKnown RBP12.63□□□□□ -0.39
ABCF3-218ENST00000498136 MLXQ9UH92 298 aa12.63□□□□□ -0.39
ABCF3-218ENST00000498136 ZNF207O43670 478 aaKnown RBP12.62□□□□□ -0.39
ABCF3-218ENST00000498136 SFT2D2O95562 160 aa12.62□□□□□ -0.39
ABCF3-218ENST00000498136 FRMD6-AS1P0C7T7 363 aa12.62□□□□□ -0.39
ABCF3-218ENST00000498136 NHLRC4P0CG21 123 aaPredicted RBP12.62□□□□□ -0.39
ABCF3-218ENST00000498136 IGHV4-30-4P0DP06 118 aa12.62□□□□□ -0.39
ABCF3-218ENST00000498136 FCGR2BP31994 310 aaPredicted RBP12.62□□□□□ -0.39
ABCF3-218ENST00000498136 CD81P60033 236 aa12.62□□□□□ -0.39
ABCF3-218ENST00000498136 ANKRD55Q3KP44 614 aa12.62□□□□□ -0.39
ABCF3-218ENST00000498136 NMSQ5H8A3 153 aa12.62□□□□□ -0.39
ABCF3-218ENST00000498136 Q8N1Y9 231 aa12.62□□□□□ -0.39
ABCF3-218ENST00000498136 C7orf50Q9BRJ6 194 aaKnown RBP12.62□□□□□ -0.39
ABCF3-218ENST00000498136 DAZ1Q9NQZ3 744 aaKnown RBP12.62□□□□□ -0.39
ABCF3-218ENST00000498136 DUXBA0A1W2PPF3 345 aa12.61□□□□□ -0.39
ABCF3-218ENST00000498136 NDUFB6O95139 128 aa12.61□□□□□ -0.39
ABCF3-218ENST00000498136 TNFRSF9Q07011 255 aa12.61□□□□□ -0.39
ABCF3-218ENST00000498136 RBPMS2Q6ZRY4 209 aaKnown RBP12.61□□□□□ -0.39
ABCF3-218ENST00000498136 SLC24A4Q8NFF2 622 aa12.61□□□□□ -0.39
ABCF3-218ENST00000498136 TUBA4BQ9H853 241 aa12.61□□□□□ -0.39
ABCF3-218ENST00000498136 FLVCR2Q9UPI3 526 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms