RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 LY6EQ16553 131 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 DPPA3Q6W0C5 159 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 PCNPQ8WW12 178 aaKnown RBP19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 C22orf15Q8WYQ4 148 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 FAM103A1Q9BTL3 118 aaKnown RBP19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 NPCDR1Q9BY65 106 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 PDZD2O15018 2839 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 NDPQ00604 133 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 TMEM144Q7Z5S9 345 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 SGMS2Q8NHU3 365 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 MISP3Q96FF7 219 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 WNT10AQ9GZT5 417 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 PFDN2Q9UHV9 154 aa19.3■□□□□ 0.68
PPP1R3F-205ENST00000495799 UNC79Q9P2D8 2635 aa19.29■□□□□ 0.68
PPP1R3F-205ENST00000495799 MDFIC2A0A1B0GVS7 189 aa19.29■□□□□ 0.68
PPP1R3F-205ENST00000495799 CAMLGP49069 296 aa19.29■□□□□ 0.68
PPP1R3F-205ENST00000495799 SPNS3Q6ZMD2 512 aa19.29■□□□□ 0.68
PPP1R3F-205ENST00000495799 TTC9CQ8N5M4 171 aa19.29■□□□□ 0.68
PPP1R3F-205ENST00000495799 PARP11Q9NR21 331 aa19.29■□□□□ 0.68
PPP1R3F-205ENST00000495799 MBP02144 154 aa19.28■□□□□ 0.68
PPP1R3F-205ENST00000495799 IER3P46695 156 aa19.28■□□□□ 0.68
PPP1R3F-205ENST00000495799 HSPB9Q9BQS6 159 aa19.28■□□□□ 0.68
PPP1R3F-205ENST00000495799 MED9Q9NWA0 146 aa19.28■□□□□ 0.68
PPP1R3F-205ENST00000495799 LSM4Q9Y4Z0 139 aaKnown RBP19.28■□□□□ 0.68
PPP1R3F-205ENST00000495799 HNF1AP20823 631 aa19.27■□□□□ 0.68
PPP1R3F-205ENST00000495799 GAMTQ14353 236 aa19.27■□□□□ 0.68
PPP1R3F-205ENST00000495799 Q6YL49 198 aa19.27■□□□□ 0.68
PPP1R3F-205ENST00000495799 PRDM13Q9H4Q3 707 aa19.27■□□□□ 0.68
PPP1R3F-205ENST00000495799 PLA2G2EQ9NZK7 142 aa19.27■□□□□ 0.68
PPP1R3F-205ENST00000495799 PLXNB1O43157 2135 aa19.27■□□□□ 0.68
PPP1R3F-205ENST00000495799 SRP14P37108 136 aaKnown RBP19.26■□□□□ 0.67
PPP1R3F-205ENST00000495799 Q6ZRG5 221 aa19.26■□□□□ 0.67
PPP1R3F-205ENST00000495799 LFNGQ8NES3 379 aa19.26■□□□□ 0.67
PPP1R3F-205ENST00000495799 ATP6V0E1O15342 81 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 MFAP2P55001 183 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 ASPHD1Q5U4P2 390 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 CXorf58Q96LI9 332 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 FNDC4Q9H6D8 234 aaPredicted RBP19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 IGHV4-59P01825 116 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 EGR2P11161 476 aaPredicted RBP19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 KRTAP1-1Q07627 177 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 TMEM41BQ5BJD5 291 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 UNQ5815/PRO19632Q6UWF5 114 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 SLC7A5P1Q8MH63 180 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 FAM110DQ8TAY7 271 aaPredicted RBP19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 FAM213BQ8TBF2 198 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 MGST2Q99735 147 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 GGTLC1Q9BX51 225 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 YAE1D1Q9NRH1 226 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 THYN1Q9P016 225 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 RFNGQ9Y644 331 aa19.25■□□□□ 0.67
PPP1R3F-205ENST00000495799 FASNP49327 2511 aaKnown RBP19.24■□□□□ 0.67
PPP1R3F-205ENST00000495799 CREBBPQ92793 2442 aa19.24■□□□□ 0.67
PPP1R3F-205ENST00000495799 ABCA1O95477 2261 aa19.24■□□□□ 0.67
PPP1R3F-205ENST00000495799 AMY1AP04745 511 aa19.24■□□□□ 0.67
PPP1R3F-205ENST00000495799 HIST1H1BP16401 226 aaKnown RBP19.24■□□□□ 0.67
PPP1R3F-205ENST00000495799 FFAR4Q5NUL3 377 aa19.24■□□□□ 0.67
PPP1R3F-205ENST00000495799 PXDC1Q5TGL8 231 aa19.24■□□□□ 0.67
PPP1R3F-205ENST00000495799 ACY3Q96HD9 319 aa19.24■□□□□ 0.67
PPP1R3F-205ENST00000495799 NUDT19A8MXV4 375 aa19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 AGPAT2O15120 278 aa19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 CRIP2P52943 208 aaPredicted RBP19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 ZNF616Q08AN1 781 aa19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 SCGB2A2Q13296 93 aa19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 ACOT6Q3I5F7 207 aaPredicted RBP19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 AKIRIN2Q53H80 203 aa19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 C9orf152Q5JTZ5 239 aa19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 COMMD7Q86VX2 200 aa19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 TMUB1Q9BVT8 246 aa19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 VPREB3Q9UKI3 123 aa19.23■□□□□ 0.67
PPP1R3F-205ENST00000495799 TSPAN15O95858 294 aa19.22■□□□□ 0.67
PPP1R3F-205ENST00000495799 MT-CO2P00403 227 aa19.22■□□□□ 0.67
PPP1R3F-205ENST00000495799 ELLP55199 621 aaPredicted RBP19.22■□□□□ 0.67
PPP1R3F-205ENST00000495799 MLANAQ16655 118 aa19.22■□□□□ 0.67
PPP1R3F-205ENST00000495799 ECSCRQ19T08 205 aa19.22■□□□□ 0.67
PPP1R3F-205ENST00000495799 C19orf35Q6ZS72 473 aa19.22■□□□□ 0.67
PPP1R3F-205ENST00000495799 OR2T6Q8NHC8 308 aa19.22■□□□□ 0.67
PPP1R3F-205ENST00000495799 IGLV11-55A0A075B6I3 123 aa19.21■□□□□ 0.67
PPP1R3F-205ENST00000495799 TEX46H3BTG2 121 aa19.21■□□□□ 0.67
PPP1R3F-205ENST00000495799 IGHG2P01859 326 aa19.21■□□□□ 0.67
PPP1R3F-205ENST00000495799 RPL29P47914 159 aaKnown RBP19.21■□□□□ 0.67
PPP1R3F-205ENST00000495799 RAB2AP61019 212 aa19.21■□□□□ 0.67
PPP1R3F-205ENST00000495799 SLC35E3Q7Z769 313 aa19.21■□□□□ 0.67
PPP1R3F-205ENST00000495799 ZNF48Q96MX3 618 aaPredicted RBP19.21■□□□□ 0.67
PPP1R3F-205ENST00000495799 DMRT1Q9Y5R6 373 aa19.21■□□□□ 0.67
PPP1R3F-205ENST00000495799 PXMP4Q9Y6I8 212 aa19.21■□□□□ 0.67
PPP1R3F-205ENST00000495799 SH2D7A6NKC9 451 aaPredicted RBP19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 I3L2K1 104 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 ATP6V1G1O75348 118 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 RND2P52198 227 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 THAP8Q8NA92 274 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 TMEM116Q8NCL8 245 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 NPIPB3Q92617 1050 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 TMEM160Q9NX00 188 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 NAV3Q8IVL0 2385 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 M6PRP20645 277 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 ACSM6Q6P461 480 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 OR5T1Q8NG75 326 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 HRH4Q9H3N8 390 aa19.2■□□□□ 0.66
PPP1R3F-205ENST00000495799 RPRMQ9NS64 109 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms