RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 HKR1P10072 659 aa15.14■□□□□ 0.01
USP39-218ENST00000493829 RPL12P30050 165 aaKnown RBP15.14■□□□□ 0.01
USP39-218ENST00000493829 NKX2-5P52952 324 aaPredicted RBP15.14■□□□□ 0.01
USP39-218ENST00000493829 RAB11AP62491 216 aa15.14■□□□□ 0.01
USP39-218ENST00000493829 SLC35B1P78383 322 aa15.14■□□□□ 0.01
USP39-218ENST00000493829 HIST2H2BDQ6DRA6 164 aa15.14■□□□□ 0.01
USP39-218ENST00000493829 STX12Q86Y82 276 aa15.14■□□□□ 0.01
USP39-218ENST00000493829 BSCL2Q96G97 398 aaPredicted RBP15.14■□□□□ 0.01
USP39-218ENST00000493829 FANCD2OSQ96PS1 177 aa15.14■□□□□ 0.01
USP39-218ENST00000493829 GON7Q9BXV9 100 aa15.14■□□□□ 0.01
USP39-218ENST00000493829 TNFSF18Q9UNG2 199 aa15.14■□□□□ 0.01
USP39-218ENST00000493829 IGLV11-55A0A075B6I3 123 aa15.13■□□□□ 0.01
USP39-218ENST00000493829 TRGV3P03979 118 aa15.13■□□□□ 0.01
USP39-218ENST00000493829 NUP62P37198 522 aaPredicted RBP15.13■□□□□ 0.01
USP39-218ENST00000493829 OPRK1P41145 380 aa15.13■□□□□ 0.01
USP39-218ENST00000493829 TPPP2P59282 170 aa15.13■□□□□ 0.01
USP39-218ENST00000493829 NHLH2Q02577 135 aa15.13■□□□□ 0.01
USP39-218ENST00000493829 ARL16Q0P5N6 197 aa15.13■□□□□ 0.01
USP39-218ENST00000493829 HAPLN4Q86UW8 402 aa15.13■□□□□ 0.01
USP39-218ENST00000493829 INO80EQ8NBZ0 244 aaPredicted RBP15.13■□□□□ 0.01
USP39-218ENST00000493829 KLK15Q9H2R5 256 aa15.13■□□□□ 0.01
USP39-218ENST00000493829 SETD2Q9BYW2 2564 aaPredicted RBP15.13■□□□□ 0.01
USP39-218ENST00000493829 C2CD3Q4AC94 2353 aa15.13■□□□□ 0.01
USP39-218ENST00000493829 RNF222A6NCQ9 220 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 EIF2B2P49770 351 aaKnown RBP15.12■□□□□ 0.01
USP39-218ENST00000493829 RHOGP84095 191 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 SMIM3Q9BZL3 60 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 SLC25A31Q9H0C2 315 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 FBXL7Q9UJT9 491 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 RNF114Q9Y508 228 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 NDUFB8O95169 186 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 IGHV3-23P01764 117 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 SULT1A1P50225 295 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 MLANAQ16655 118 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 NOXA1Q86UR1 476 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 C11orf44Q8N8P7 122 aa15.12■□□□□ 0.01
USP39-218ENST00000493829 IGLV1-40P01703 118 aa15.11■□□□□ 0.01
USP39-218ENST00000493829 IGHG4P01861 327 aa15.11■□□□□ 0.01
USP39-218ENST00000493829 TMEM65Q6PI78 240 aa15.11■□□□□ 0.01
USP39-218ENST00000493829 ACOT7LQ6ZUV0 252 aa15.11■□□□□ 0.01
USP39-218ENST00000493829 OR5AU1Q8NGC0 362 aa15.11■□□□□ 0.01
USP39-218ENST00000493829 MFFQ9GZY8 342 aa15.11■□□□□ 0.01
USP39-218ENST00000493829 FNDC4Q9H6D8 234 aaPredicted RBP15.11■□□□□ 0.01
USP39-218ENST00000493829 CLPSL1A2RUU4 121 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 PMS2P5A8MQ11 134 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 CYB5BO43169 146 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 MT-CO2P00403 227 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 SLC38A11Q08AI6 406 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 CLINT1Q14677 625 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 KRTAP24-1Q3LI83 254 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 TEX38Q6PEX7 206 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 LURAP1LQ8IV03 231 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 LILRB2Q8N423 598 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 OR10P1Q8NGE3 313 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 OR1L6Q8NGR2 347 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 AQP10Q96PS8 301 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 HSPB11Q9Y547 144 aa15.1■□□□□ 0.01
USP39-218ENST00000493829 SMCO3A2RU48 225 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 MFSD2BA6NFX1 497 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 RPLP1P05386 114 aaKnown RBP15.09■□□□□ 0.01
USP39-218ENST00000493829 HIST1H1BP16401 226 aaKnown RBP15.09■□□□□ 0.01
USP39-218ENST00000493829 CXCL2P19875 107 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 PSMB8P28062 276 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 C15orf32Q32M92 178 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 KHDC1LQ5JSQ8 128 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 SLC16A13Q7RTY0 426 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 OR5C1Q8NGR4 320 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 RNASEH2CQ8TDP1 164 aaKnown RBP15.09■□□□□ 0.01
USP39-218ENST00000493829 HYLS1Q96M11 299 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 PRSS46E5RG02 174 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 K7EIM0 57 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 CORTO00230 105 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 HNRNPCP07910 306 aaKnown RBP eCLIP15.09■□□□□ 0.01
USP39-218ENST00000493829 RAB9AP51151 201 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 PVRIGQ6DKI7 326 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 NECAP1Q8NC96 275 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 THYN1Q9P016 225 aa15.09■□□□□ 0.01
USP39-218ENST00000493829 TRBV9A0A0B4J1U6 114 aa15.08■□□□□ 0
USP39-218ENST00000493829 HMSDA8MTL9 139 aa15.08■□□□□ 0
USP39-218ENST00000493829 H3BUA1 57 aa15.08■□□□□ 0
USP39-218ENST00000493829 I3L2K1 104 aa15.08■□□□□ 0
USP39-218ENST00000493829 IGHV3-11P01762 117 aa15.08■□□□□ 0
USP39-218ENST00000493829 ATP5IP56385 69 aaPredicted RBP15.08■□□□□ 0
USP39-218ENST00000493829 HBG1P69891 147 aa15.08■□□□□ 0
USP39-218ENST00000493829 HBG2P69892 147 aa15.08■□□□□ 0
USP39-218ENST00000493829 CD69Q07108 199 aa15.08■□□□□ 0
USP39-218ENST00000493829 BAXQ07812 192 aa15.08■□□□□ 0
USP39-218ENST00000493829 FOXE3Q13461 319 aa15.08■□□□□ 0
USP39-218ENST00000493829 EXOSC2Q13868 293 aaKnown RBP15.08■□□□□ 0
USP39-218ENST00000493829 UBAC2Q8NBM4 344 aa15.08■□□□□ 0
USP39-218ENST00000493829 OR4X2Q8NGF9 303 aa15.08■□□□□ 0
USP39-218ENST00000493829 OR1S2Q8NGQ3 325 aa15.08■□□□□ 0
USP39-218ENST00000493829 ACY3Q96HD9 319 aa15.08■□□□□ 0
USP39-218ENST00000493829 OR5B12Q96R08 314 aa15.08■□□□□ 0
USP39-218ENST00000493829 MRPL36Q9P0J6 103 aaKnown RBP15.08■□□□□ 0
USP39-218ENST00000493829 FBXL17Q9UF56 701 aa15.08■□□□□ 0
USP39-218ENST00000493829 PROK1P58294 105 aa15.07■□□□□ 0
USP39-218ENST00000493829 SCARB1Q8WTV0 552 aa15.07■□□□□ 0
USP39-218ENST00000493829 SLA2Q9H6Q3 261 aa15.07■□□□□ 0
USP39-218ENST00000493829 UBE2L5PA0A1B0GUS4 154 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms