RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SUB1P53999 127 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDC42SE1-206ENST00000492796 UBE2MP61081 183 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-206ENST00000492796 SPINK9Q5DT21 86 aa8.11□□□□□ -1.11
CDC42SE1-206ENST00000492796 DEFB121Q5J5C9 76 aa8.11□□□□□ -1.11
CDC42SE1-206ENST00000492796 Q6ZRM9 215 aa8.11□□□□□ -1.11
CDC42SE1-206ENST00000492796 CENPSQ8N2Z9 138 aa8.11□□□□□ -1.11
CDC42SE1-206ENST00000492796 SCARB1Q8WTV0 552 aa8.11□□□□□ -1.11
CDC42SE1-206ENST00000492796 GPR146Q96CH1 333 aa8.11□□□□□ -1.11
CDC42SE1-206ENST00000492796 MISP3Q96FF7 219 aa8.11□□□□□ -1.11
CDC42SE1-206ENST00000492796 LSM4Q9Y4Z0 139 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-206ENST00000492796 A6NHS1 94 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 C2orf70A6NJV1 201 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 I3L2K1 104 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 NDUFB6O95139 128 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 SULT1A3P0DMM9 295 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 SULT1A4P0DMN0 295 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 VAMP1P23763 118 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 CCR6P51684 374 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 Q56UQ5 140 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 NMSQ5H8A3 153 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 PVRIGQ6DKI7 326 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 LCN12Q6JVE5 192 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 HAPLN4Q86UW8 402 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 LRTM2Q8N967 370 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 DYNLRB2Q8TF09 96 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 TXN2Q99757 166 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 CCDC32Q9BV29 185 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 ZNF436Q9C0F3 470 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 PALMDQ9NP74 551 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 PRR13Q9NZ81 148 aa8.1□□□□□ -1.11
CDC42SE1-206ENST00000492796 IGHV3-21A0A0B4J1V1 117 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 TMEM213A2RRL7 107 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 OR2T8A6NH00 312 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 F8W735 103 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 SFT2D2O95562 160 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 MT-CO2P00403 227 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 RNASE2P10153 161 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 MFAP4P55083 255 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 ELLP55199 621 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 PPP1R1AQ13522 171 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 SMCO1Q147U7 214 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 CNPY1Q3B7I2 92 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 BSXQ3C1V8 233 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 LYZL2Q7Z4W2 148 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 UBAC2Q8NBM4 344 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 S100ZQ8WXG8 99 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 TMEM190Q8WZ59 177 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 MARC2Q969Z3 335 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 B9D2Q9BPU9 175 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 ZC4H2Q9NQZ6 224 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 TECRQ9NZ01 308 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 UFC1Q9Y3C8 167 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 SMAD5-AS1Q9Y6J3 95 aa8.09□□□□□ -1.11
CDC42SE1-206ENST00000492796 A0A1B0GU03 582 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 ZNF320A2RRD8 509 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 NDUFA4O00483 81 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 NUPL2O15504 423 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 SLC25A6P12236 298 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 FOLR2P14207 255 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 CBLN1P23435 193 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 BTCP35070 178 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 HTR2BP41595 481 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 NPBWR1P48145 328 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 RELQ04864 619 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 CD69Q07108 199 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 ANKRD55Q3KP44 614 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 UNQ9165/PRO28630Q6UXU0 137 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 ADAMTSL5Q6ZMM2 481 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 PINX1Q96BK5 328 aaKnown RBP8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 CHRDL1Q9BU40 450 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 HIPK2Q9H2X6 1198 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 HEYLQ9NQ87 328 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 PTTG2Q9NZH5 202 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 HSPB7Q9UBY9 170 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 TMED3Q9Y3Q3 217 aa8.08□□□□□ -1.12
CDC42SE1-206ENST00000492796 LINC00854A0A1B0GVQ3 168 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 CEBPZOSA8MTT3 80 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 GNG7O60262 68 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 SCGB2A1O75556 95 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 CTSGP08311 255 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 C8orf88P0DMB2 117 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 ADMP35318 185 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 TNFRSF9Q07011 255 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 DEFB114Q30KQ6 69 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 CD300EQ496F6 205 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 C2orf83Q53S99 150 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 GTSCR1Q86UQ5 136 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 NOXA1Q86UR1 476 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 DUSP18Q8NEJ0 188 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 SLC24A4Q8NFF2 622 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 OR1S1Q8NH92 325 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 DAZ1Q9NQZ3 744 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 BATF3Q9NR55 127 aa8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 MRPL27Q9P0M9 148 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-206ENST00000492796 SORL1Q92673 2214 aa8.06□□□□□ -1.12
CDC42SE1-206ENST00000492796 IGHV3-35A0A0C4DH35 117 aa8.06□□□□□ -1.12
CDC42SE1-206ENST00000492796 RPS10-NUDT3A0A1W2PQS6 291 aa8.06□□□□□ -1.12
CDC42SE1-206ENST00000492796 C9orf170A2RU37 121 aa8.06□□□□□ -1.12
CDC42SE1-206ENST00000492796 FAM90A26D6RGX4 464 aa8.06□□□□□ -1.12
CDC42SE1-206ENST00000492796 K7EMT4 169 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 1101.2 ms