RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 KCNIP3Q9Y2W7 256 aa17.2■□□□□ 0.34
TRAF4-211ENST00000478021 I3L2K1 104 aa17.19■□□□□ 0.34
TRAF4-211ENST00000478021 FRMD6-AS1P0C7T7 363 aa17.19■□□□□ 0.34
TRAF4-211ENST00000478021 TMED4Q7Z7H5 227 aa17.19■□□□□ 0.34
TRAF4-211ENST00000478021 GALNT14Q96FL9 552 aa17.19■□□□□ 0.34
TRAF4-211ENST00000478021 ZNF436Q9C0F3 470 aaPredicted RBP17.19■□□□□ 0.34
TRAF4-211ENST00000478021 ENY2Q9NPA8 101 aa17.19■□□□□ 0.34
TRAF4-211ENST00000478021 TMEM56-RWDD3S4R434 201 aa17.19■□□□□ 0.34
TRAF4-211ENST00000478021 DNAH9Q9NYC9 4486 aa17.19■□□□□ 0.34
TRAF4-211ENST00000478021 ADMP35318 185 aa17.18■□□□□ 0.34
TRAF4-211ENST00000478021 SNCAP37840 140 aa17.18■□□□□ 0.34
TRAF4-211ENST00000478021 SUPT4H1P63272 117 aaKnown RBP17.18■□□□□ 0.34
TRAF4-211ENST00000478021 UXS1Q8NBZ7 420 aa17.18■□□□□ 0.34
TRAF4-211ENST00000478021 MLXQ9UH92 298 aa17.18■□□□□ 0.34
TRAF4-211ENST00000478021 COL7A1Q02388 2944 aa17.18■□□□□ 0.34
TRAF4-211ENST00000478021 IGHV3OR16-8A0A075B7F1 116 aa17.17■□□□□ 0.34
TRAF4-211ENST00000478021 NXPH3O95157 252 aa17.17■□□□□ 0.34
TRAF4-211ENST00000478021 IGHV4-30-4P0DP06 118 aa17.17■□□□□ 0.34
TRAF4-211ENST00000478021 MFAP4P55083 255 aa17.17■□□□□ 0.34
TRAF4-211ENST00000478021 SPSB3Q6PJ21 355 aa17.17■□□□□ 0.34
TRAF4-211ENST00000478021 GTSCR1Q86UQ5 136 aa17.17■□□□□ 0.34
TRAF4-211ENST00000478021 SBSPONQ8IVN8 264 aa17.17■□□□□ 0.34
TRAF4-211ENST00000478021 WDR89Q96FK6 387 aaPredicted RBP17.17■□□□□ 0.34
TRAF4-211ENST00000478021 PALMDQ9NP74 551 aa17.17■□□□□ 0.34
TRAF4-211ENST00000478021 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.17■□□□□ 0.34
TRAF4-211ENST00000478021 TECRQ9NZ01 308 aaKnown RBP17.17■□□□□ 0.34
TRAF4-211ENST00000478021 ZNF785A8K8V0 405 aa17.16■□□□□ 0.34
TRAF4-211ENST00000478021 INS-IGF2F8WCM5 200 aa17.16■□□□□ 0.34
TRAF4-211ENST00000478021 NHLRC4P0CG21 123 aaPredicted RBP17.16■□□□□ 0.34
TRAF4-211ENST00000478021 RNASE2P10153 161 aaKnown RBP17.16■□□□□ 0.34
TRAF4-211ENST00000478021 BAK1Q16611 211 aa17.16■□□□□ 0.34
TRAF4-211ENST00000478021 GUCA2BQ16661 112 aa17.16■□□□□ 0.34
TRAF4-211ENST00000478021 BTNL8Q6UX41 500 aa17.16■□□□□ 0.34
TRAF4-211ENST00000478021 TMEM190Q8WZ59 177 aa17.16■□□□□ 0.34
TRAF4-211ENST00000478021 IL22RA2Q969J5 263 aa17.16■□□□□ 0.34
TRAF4-211ENST00000478021 ATP6V0BQ99437 205 aa17.16■□□□□ 0.34
TRAF4-211ENST00000478021 NDUFA13Q9P0J0 144 aa17.16■□□□□ 0.34
TRAF4-211ENST00000478021 UFC1Q9Y3C8 167 aa17.16■□□□□ 0.34
TRAF4-211ENST00000478021 CTSGP08311 255 aa17.15■□□□□ 0.34
TRAF4-211ENST00000478021 INPP1P49441 399 aa17.15■□□□□ 0.34
TRAF4-211ENST00000478021 SPCS3P61009 180 aa17.15■□□□□ 0.34
TRAF4-211ENST00000478021 C20orf24Q9BUV8 137 aa17.15■□□□□ 0.34
TRAF4-211ENST00000478021 NDUFA4O00483 81 aa17.14■□□□□ 0.33
TRAF4-211ENST00000478021 ZNF207O43670 478 aaKnown RBP17.14■□□□□ 0.33
TRAF4-211ENST00000478021 AARDQ4LEZ3 155 aa17.14■□□□□ 0.33
TRAF4-211ENST00000478021 TRIQKQ629K1 86 aa17.14■□□□□ 0.33
TRAF4-211ENST00000478021 LYZL2Q7Z4W2 148 aa17.14■□□□□ 0.33
TRAF4-211ENST00000478021 TMEM61Q8N0U2 210 aa17.14■□□□□ 0.33
TRAF4-211ENST00000478021 SDHCQ99643 169 aaPredicted RBP17.14■□□□□ 0.33
TRAF4-211ENST00000478021 LINC00854A0A1B0GVQ3 168 aa17.13■□□□□ 0.33
TRAF4-211ENST00000478021 NUPL2O15504 423 aaKnown RBP17.13■□□□□ 0.33
TRAF4-211ENST00000478021 GNG7O60262 68 aa17.13■□□□□ 0.33
TRAF4-211ENST00000478021 ANXA3P12429 323 aa17.13■□□□□ 0.33
TRAF4-211ENST00000478021 SUB1P53999 127 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRAF4-211ENST00000478021 ELLP55199 621 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-211ENST00000478021 CD81P60033 236 aa17.13■□□□□ 0.33
TRAF4-211ENST00000478021 LGI3Q8N145 548 aa17.13■□□□□ 0.33
TRAF4-211ENST00000478021 OR52E5Q8NH55 327 aa17.13■□□□□ 0.33
TRAF4-211ENST00000478021 DEDD2Q8WXF8 326 aa17.13■□□□□ 0.33
TRAF4-211ENST00000478021 ZNF414Q96IQ9 312 aa17.13■□□□□ 0.33
TRAF4-211ENST00000478021 SLC25A21Q9BQT8 299 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-211ENST00000478021 GAR1Q9NY12 217 aaKnown RBP17.13■□□□□ 0.33
TRAF4-211ENST00000478021 MRPL27Q9P0M9 148 aaKnown RBP17.13■□□□□ 0.33
TRAF4-211ENST00000478021 U3KQK5 164 aa17.13■□□□□ 0.33
TRAF4-211ENST00000478021 A0A0B4J2A0 478 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 CEBPZOSA8MTT3 80 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 SCAF4O95104 1147 aaKnown RBP17.12■□□□□ 0.33
TRAF4-211ENST00000478021 CD7P09564 240 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 C8orf88P0DMB2 117 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 SULT1A3P0DMM9 295 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 SULT1A4P0DMN0 295 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 VAMP1P23763 118 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 CCR6P51684 374 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 MARC2Q969Z3 335 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 TXN2Q99757 166 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 NEURL2Q9BR09 285 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 C19orf73Q9NVV2 129 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 SHPKQ9UHJ6 478 aa17.12■□□□□ 0.33
TRAF4-211ENST00000478021 FCGR2BP31994 310 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-211ENST00000478021 TMEM128Q5BJH2 165 aa17.11■□□□□ 0.33
TRAF4-211ENST00000478021 NMSQ5H8A3 153 aa17.11■□□□□ 0.33
TRAF4-211ENST00000478021 PVRIGQ6DKI7 326 aa17.11■□□□□ 0.33
TRAF4-211ENST00000478021 WFDC10AQ9H1F0 79 aa17.11■□□□□ 0.33
TRAF4-211ENST00000478021 HEYLQ9NQ87 328 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-211ENST00000478021 DAZ1Q9NQZ3 744 aaKnown RBP17.11■□□□□ 0.33
TRAF4-211ENST00000478021 CORTO00230 105 aa17.1■□□□□ 0.33
TRAF4-211ENST00000478021 OPRK1P41145 380 aa17.1■□□□□ 0.33
TRAF4-211ENST00000478021 SRPXP78539 464 aa17.1■□□□□ 0.33
TRAF4-211ENST00000478021 RELQ04864 619 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-211ENST00000478021 MLANAQ16655 118 aa17.1■□□□□ 0.33
TRAF4-211ENST00000478021 BSXQ3C1V8 233 aa17.1■□□□□ 0.33
TRAF4-211ENST00000478021 DUSP18Q8NEJ0 188 aa17.1■□□□□ 0.33
TRAF4-211ENST00000478021 FNDC4Q9H6D8 234 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-211ENST00000478021 TUBA4BQ9H853 241 aa17.1■□□□□ 0.33
TRAF4-211ENST00000478021 A8MZ25 164 aa17.09■□□□□ 0.33
TRAF4-211ENST00000478021 YIF1AO95070 293 aa17.09■□□□□ 0.33
TRAF4-211ENST00000478021 NPBWR1P48145 328 aa17.09■□□□□ 0.33
TRAF4-211ENST00000478021 PPP1R1AQ13522 171 aa17.09■□□□□ 0.33
TRAF4-211ENST00000478021 SMCO1Q147U7 214 aa17.09■□□□□ 0.33
TRAF4-211ENST00000478021 RBMS2Q15434 407 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms