RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ANAPC13Q9BS18 74 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 TMEM106BQ9NUM4 274 aa9.78□□□□□ -0.84
U2AF1-209ENST00000475639 IGHV3OR15-7A0A075B7D8 119 aa9.77□□□□□ -0.84
U2AF1-209ENST00000475639 TDGF1P13385 188 aa9.77□□□□□ -0.84
U2AF1-209ENST00000475639 ACTL10Q5JWF8 245 aa9.77□□□□□ -0.84
U2AF1-209ENST00000475639 PHLDA1Q8WV24 401 aaPredicted RBP9.77□□□□□ -0.84
U2AF1-209ENST00000475639 KIAA2026Q5HYC2 2103 aa9.77□□□□□ -0.84
U2AF1-209ENST00000475639 PLCE1Q9P212 2302 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 A0A1B0GUS0 222 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 GGTLC3B5MD39 225 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 NDUFB8O95169 186 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 DPH3P1Q9H4G8 78 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 C21orf140B9A014 251 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 CCL21O00585 134 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 TNFSF13O75888 250 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 EFEMP2O95967 443 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 GPR183P32249 361 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 MAGEA5P43359 124 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 KLHDC3Q9BQ90 382 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 RANBP2P49792 3224 aaKnown RBP9.77□□□□□ -0.85
U2AF1-209ENST00000475639 M0R381 172 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 NUPR1O60356 82 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 CRPP02741 224 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 SMIM10L1P0DMW3 83 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 FGF12P61328 243 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 PCSK4Q6UW60 755 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 SMIM10Q96HG1 83 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 PCNX3Q9H6A9 2034 aa9.77□□□□□ -0.85
U2AF1-209ENST00000475639 K7EP13 123 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 FTH1P19P0C7X4 201 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 TMEM187Q14656 261 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 CXorf66Q5JRM2 361 aaPredicted RBP9.76□□□□□ -0.85
U2AF1-209ENST00000475639 MRPL32Q9BYC8 188 aaKnown RBP9.76□□□□□ -0.85
U2AF1-209ENST00000475639 CHODLQ9H9P2 273 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 RNF115Q9Y4L5 304 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 HRKO00198 91 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 YPEL1O60688 119 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 FAM27BQ5VT28 67 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 TMEM256Q8N2U0 113 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 YPEL2Q96QA6 119 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 LIME1Q9H400 295 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 ZIC3O60481 467 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 PLNP26678 52 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 PAX2Q02962 417 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 C1orf185Q5T7R7 199 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 NABP2Q9BQ15 211 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 NCOR1P1Q9H4R4 102 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 FOXI3A8MTJ6 420 aaPredicted RBP9.76□□□□□ -0.85
U2AF1-209ENST00000475639 MAJINQ3KP22 176 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 RIPPLY2Q5TAB7 128 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 SVIPQ8NHG7 77 aa9.76□□□□□ -0.85
U2AF1-209ENST00000475639 A0A1B0GUT8 65 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 VENTXO95231 258 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 PF4P02776 101 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 ATP5G2Q06055 141 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 SSBP3Q9BWW4 388 aaPredicted RBP9.75□□□□□ -0.85
U2AF1-209ENST00000475639 TCF19Q9Y242 345 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 MKI67P46013 3256 aaKnown RBP9.75□□□□□ -0.85
U2AF1-209ENST00000475639 A0A0U1RQV5 110 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.75□□□□□ -0.85
U2AF1-209ENST00000475639 HAX1O00165 279 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 IGKV3-20P01619 116 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 C3AR1Q16581 482 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 TEX43Q6ZNM6 134 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 UCN2Q96RP3 112 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 C11orf1Q9H5F2 150 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 CISD1Q9NZ45 108 aaKnown RBP9.75□□□□□ -0.85
U2AF1-209ENST00000475639 ODAMA1E959 279 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A10PA6NDY2 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A18PA6NE21 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A16PA6NEW6 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A20PA6NIJ5 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A8PA6NJQ4 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A7PA6NKC0 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A22PA8MWA6 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A12PA8MX19 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A5PA8MXJ8 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A23PA8MXZ1 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A15PP0C7V4 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A13PP0C7W8 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A14PP0C7W9 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 FAM90A24PP0C7X0 464 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 ARL14EPLP0DKL9 152 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 UCNP55089 124 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 GAGE2BQ13066 116 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 CEACAM21Q3KPI0 293 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 GAGE2EQ4V326 116 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 CT55Q8WUE5 264 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 GAGE2DQ9UEU5 116 aa9.75□□□□□ -0.85
U2AF1-209ENST00000475639 TRAV12-3A0A0B4J271 114 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 CBLN1P23435 193 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 ASIPP42127 132 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 TPTE2P1Q5T6R2 138 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 FAM71F2Q6NXP2 309 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 CENPVQ7Z7K6 275 aaPredicted RBP9.74□□□□□ -0.85
U2AF1-209ENST00000475639 TMEM86BQ8N661 226 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 STPG4Q8N801 248 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 LRTM2Q8N967 370 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 NPIPB3Q92617 1050 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms