RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 LINC00482Q8N8I6 264 aa14.71□□□□□ -0.05
USP11-205ENST00000467378 OR1L6Q8NGR2 347 aa14.71□□□□□ -0.05
USP11-205ENST00000467378 OR1P1Q8NH06 330 aa14.71□□□□□ -0.05
USP11-205ENST00000467378 OR1S1Q8NH92 325 aa14.71□□□□□ -0.05
USP11-205ENST00000467378 RCC1LQ96I51 464 aaKnown RBP14.71□□□□□ -0.05
USP11-205ENST00000467378 TENM2Q9NT68 2774 aa14.7□□□□□ -0.06
USP11-205ENST00000467378 HOXA1P49639 335 aaPredicted RBP14.7□□□□□ -0.06
USP11-205ENST00000467378 TNFRSF9Q07011 255 aa14.7□□□□□ -0.06
USP11-205ENST00000467378 C12orf45Q8N5I9 185 aaPredicted RBP14.7□□□□□ -0.06
USP11-205ENST00000467378 ENY2Q9NPA8 101 aa14.7□□□□□ -0.06
USP11-205ENST00000467378 THYN1Q9P016 225 aa14.7□□□□□ -0.06
USP11-205ENST00000467378 IGHV4OR15-8A0A075B7B6 117 aa14.69□□□□□ -0.06
USP11-205ENST00000467378 A0A087WW49 117 aa14.69□□□□□ -0.06
USP11-205ENST00000467378 CEBPZOSA8MTT3 80 aa14.69□□□□□ -0.06
USP11-205ENST00000467378 CYB5BO43169 146 aa14.69□□□□□ -0.06
USP11-205ENST00000467378 IFNA21P01568 189 aa14.69□□□□□ -0.06
USP11-205ENST00000467378 RNASE2P10153 161 aaKnown RBP14.69□□□□□ -0.06
USP11-205ENST00000467378 ZNF616Q08AN1 781 aa14.69□□□□□ -0.06
USP11-205ENST00000467378 EXOSC2Q13868 293 aaKnown RBP14.69□□□□□ -0.06
USP11-205ENST00000467378 BSXQ3C1V8 233 aa14.69□□□□□ -0.06
USP11-205ENST00000467378 PVRIGQ6DKI7 326 aa14.69□□□□□ -0.06
USP11-205ENST00000467378 RBKSQ9H477 322 aa14.69□□□□□ -0.06
USP11-205ENST00000467378 PEF1Q9UBV8 284 aaKnown RBP14.69□□□□□ -0.06
USP11-205ENST00000467378 DYNC2H1Q8NCM8 4307 aaKnown RBP14.69□□□□□ -0.06
USP11-205ENST00000467378 RYR2Q92736 4967 aa14.68□□□□□ -0.06
USP11-205ENST00000467378 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.68□□□□□ -0.06
USP11-205ENST00000467378 ANKRD34BA5PLL1 514 aa14.68□□□□□ -0.06
USP11-205ENST00000467378 LINC01619G3V211 115 aa14.68□□□□□ -0.06
USP11-205ENST00000467378 PRAF2O60831 178 aa14.68□□□□□ -0.06
USP11-205ENST00000467378 PTTG1O95997 202 aa14.68□□□□□ -0.06
USP11-205ENST00000467378 NHLRC4P0CG21 123 aaPredicted RBP14.68□□□□□ -0.06
USP11-205ENST00000467378 SNCAP37840 140 aa14.68□□□□□ -0.06
USP11-205ENST00000467378 DPF1Q92782 380 aa14.68□□□□□ -0.06
USP11-205ENST00000467378 OR10C1Q96KK4 312 aa14.68□□□□□ -0.06
USP11-205ENST00000467378 RANGRFQ9HD47 186 aaPredicted RBP14.68□□□□□ -0.06
USP11-205ENST00000467378 HEYLQ9NQ87 328 aaPredicted RBP14.68□□□□□ -0.06
USP11-205ENST00000467378 S4R3C0 116 aa14.68□□□□□ -0.06
USP11-205ENST00000467378 MFSD2BA6NFX1 497 aa14.67□□□□□ -0.06
USP11-205ENST00000467378 FAM90A26D6RGX4 464 aa14.67□□□□□ -0.06
USP11-205ENST00000467378 TRBV12-3P01733 135 aa14.67□□□□□ -0.06
USP11-205ENST00000467378 IGHV3-23P01764 117 aa14.67□□□□□ -0.06
USP11-205ENST00000467378 DCTN2Q13561 401 aaKnown RBP14.67□□□□□ -0.06
USP11-205ENST00000467378 UXS1Q8NBZ7 420 aa14.67□□□□□ -0.06
USP11-205ENST00000467378 VN1R17PQ8TDU5 208 aa14.67□□□□□ -0.06
USP11-205ENST00000467378 DTD1Q8TEA8 209 aa14.67□□□□□ -0.06
USP11-205ENST00000467378 EEF1AKMT3Q96AZ1 226 aa14.67□□□□□ -0.06
USP11-205ENST00000467378 CXorf58Q96LI9 332 aa14.67□□□□□ -0.06
USP11-205ENST00000467378 CCDC140Q96MF4 163 aa14.67□□□□□ -0.06
USP11-205ENST00000467378 GPN1Q9HCN4 374 aaPredicted RBP14.67□□□□□ -0.06
USP11-205ENST00000467378 SNRPGP15A8MWD9 76 aa14.66□□□□□ -0.06
USP11-205ENST00000467378 K7EIM0 57 aa14.66□□□□□ -0.06
USP11-205ENST00000467378 OR8U8P0C7N1 319 aa14.66□□□□□ -0.06
USP11-205ENST00000467378 HTR2BP41595 481 aa14.66□□□□□ -0.06
USP11-205ENST00000467378 SUB1P53999 127 aaKnown RBP eCLIP14.66□□□□□ -0.06
USP11-205ENST00000467378 ID3Q02535 119 aa14.66□□□□□ -0.06
USP11-205ENST00000467378 EGFEM1PQ0D2K5 195 aa14.66□□□□□ -0.06
USP11-205ENST00000467378 OR4D5Q8NGN0 318 aa14.66□□□□□ -0.06
USP11-205ENST00000467378 ZNF502Q8TBZ5 544 aa14.66□□□□□ -0.06
USP11-205ENST00000467378 SCARB1Q8WTV0 552 aa14.66□□□□□ -0.06
USP11-205ENST00000467378 HIPK2Q9H2X6 1198 aa14.66□□□□□ -0.06
USP11-205ENST00000467378 TRBV7-1A0A0A6YYK4 115 aa14.65□□□□□ -0.06
USP11-205ENST00000467378 I3L2K1 104 aa14.65□□□□□ -0.06
USP11-205ENST00000467378 CCSO14618 274 aa14.65□□□□□ -0.06
USP11-205ENST00000467378 SLURP1P55000 103 aa14.65□□□□□ -0.06
USP11-205ENST00000467378 FAM209BQ5JX69 171 aa14.65□□□□□ -0.06
USP11-205ENST00000467378 MISP3Q96FF7 219 aa14.65□□□□□ -0.06
USP11-205ENST00000467378 KRTAP17-1Q9BYP8 105 aa14.65□□□□□ -0.06
USP11-205ENST00000467378 IGHV3-21A0A0B4J1V1 117 aa14.64□□□□□ -0.07
USP11-205ENST00000467378 IAH1Q2TAA2 248 aaPredicted RBP14.64□□□□□ -0.07
USP11-205ENST00000467378 C2orf83Q53S99 150 aa14.64□□□□□ -0.07
USP11-205ENST00000467378 CLEC19AQ6UXS0 136 aa14.64□□□□□ -0.07
USP11-205ENST00000467378 ZBTB8BQ8NAP8 495 aaPredicted RBP14.64□□□□□ -0.07
USP11-205ENST00000467378 TMEM170AQ8WVE7 144 aa14.64□□□□□ -0.07
USP11-205ENST00000467378 DCUN1D4Q92564 292 aa14.64□□□□□ -0.07
USP11-205ENST00000467378 DLX4Q92988 240 aaPredicted RBP14.64□□□□□ -0.07
USP11-205ENST00000467378 BMPR1BO00238 502 aa14.63□□□□□ -0.07
USP11-205ENST00000467378 SYNGR2O43760 224 aa14.63□□□□□ -0.07
USP11-205ENST00000467378 MED6O75586 246 aa14.63□□□□□ -0.07
USP11-205ENST00000467378 MT-CO2P00403 227 aa14.63□□□□□ -0.07
USP11-205ENST00000467378 CLEC3BP05452 202 aa14.63□□□□□ -0.07
USP11-205ENST00000467378 CASC10Q5T4H9 136 aa14.63□□□□□ -0.07
USP11-205ENST00000467378 SLC24A4Q8NFF2 622 aa14.63□□□□□ -0.07
USP11-205ENST00000467378 MAGT1Q9H0U3 335 aa14.63□□□□□ -0.07
USP11-205ENST00000467378 GAR1Q9NY12 217 aaKnown RBP14.63□□□□□ -0.07
USP11-205ENST00000467378 U3KQ87 197 aa14.63□□□□□ -0.07
USP11-205ENST00000467378 PPP5D1E7EU14 171 aa14.62□□□□□ -0.07
USP11-205ENST00000467378 F8W735 103 aaPredicted RBP14.62□□□□□ -0.07
USP11-205ENST00000467378 CORTO00230 105 aa14.62□□□□□ -0.07
USP11-205ENST00000467378 ZP3P21754 424 aa14.62□□□□□ -0.07
USP11-205ENST00000467378 NKX2-1P43699 371 aaPredicted RBP14.62□□□□□ -0.07
USP11-205ENST00000467378 PINX1Q96BK5 328 aaKnown RBP14.62□□□□□ -0.07
USP11-205ENST00000467378 ATP6V0BQ99437 205 aa14.62□□□□□ -0.07
USP11-205ENST00000467378 GPR61Q9BZJ8 451 aa14.62□□□□□ -0.07
USP11-205ENST00000467378 C21orf62Q9NYP8 219 aa14.62□□□□□ -0.07
USP11-205ENST00000467378 IAPPP10997 89 aa14.61□□□□□ -0.07
USP11-205ENST00000467378 NPY1RP25929 384 aa14.61□□□□□ -0.07
USP11-205ENST00000467378 ARL3P36405 182 aa14.61□□□□□ -0.07
USP11-205ENST00000467378 POLR2GP62487 172 aaKnown RBP eCLIP14.61□□□□□ -0.07
USP11-205ENST00000467378 KLF5Q13887 457 aaPredicted RBP14.61□□□□□ -0.07
USP11-205ENST00000467378 MLANAQ16655 118 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms