RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 FCN1O00602 326 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 CD33P20138 364 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 CENPWQ5EE01 88 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 TPTE2P1Q5T6R2 138 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 STUMQ69YW2 141 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 MOB3BQ86TA1 216 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 FAM122AQ96E09 287 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 TBX15Q96SF7 602 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 HINT2Q9BX68 163 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 GNB1LQ9BYB4 327 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 PLEKHA3Q9HB20 300 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 DSCAML1Q8TD84 2053 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 HELTA6NFD8 242 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 SRRM4A7MD48 611 aaKnown RBP11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 RAB4AP20338 218 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 CRYBB3P26998 211 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 IER3P46695 156 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 GNG4P50150 75 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 RANP62826 216 aaKnown RBP11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 TEX43Q6ZNM6 134 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 PNKDQ8N490 385 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 SLC35E1Q96K37 410 aa11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 TECRQ9NZ01 308 aaKnown RBP11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 TLN1Q9Y490 2541 aaKnown RBP11.99□□□□□ -0.49
PRPF38B-204ENST00000467302 TCAPO15273 167 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 MMP23AO75900 390 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 IGKV1-16P04430 117 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 OR5G3P0C626 314 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 CT45A6P0DMU7 189 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 CT45A5P0DMU8 189 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 CT45A7P0DMV0 189 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 CA7P43166 264 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 ADIPOQQ15848 244 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 C2orf83Q53S99 150 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 ST6GALNAC3Q8NDV1 305 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 GAFA1Q96PS6 74 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 TNCP24821 2201 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 IGF2RP11717 2491 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 ZNF705FA8MVS1 300 aaPredicted RBP11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 VSTM5A8MXK1 200 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 SNURFLB1AK76 121 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 M0R143 59 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 ZNF705DP0CH99 300 aaPredicted RBP11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 ZNF705BP0CI00 300 aaPredicted RBP11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 IRF2P14316 349 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 ATP5IP56385 69 aaPredicted RBP11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 CX3CL1P78423 397 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 PQLC2Q6ZP29 291 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 SLC25A48Q6ZT89 311 aaKnown RBP11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 OR8I2Q8N0Y5 310 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 C19orf24Q9BVV8 132 aa11.98□□□□□ -0.49
PRPF38B-204ENST00000467302 TEX50A0A1B0GTY4 177 aa11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 GGTLC3B5MD39 225 aa11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 F2Z2F3 143 aa11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 GNG10P50151 68 aa11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 TDRG1Q3Y452 100 aa11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 DEFB108BQ8NET1 73 aa11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 C20orf144Q9BQM9 153 aa11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 HSPB9Q9BQS6 159 aa11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 OSTCQ9NRP0 149 aa11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 RPUSD1Q9UJJ7 312 aaKnown RBP11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 PLCE1Q9P212 2302 aa11.97□□□□□ -0.49
PRPF38B-204ENST00000467302 C17orf100A8MU93 164 aa11.96□□□□□ -0.49
PRPF38B-204ENST00000467302 IGLV2-8P01709 118 aa11.96□□□□□ -0.49
PRPF38B-204ENST00000467302 TNFRSF1AP19438 455 aa11.96□□□□□ -0.49
PRPF38B-204ENST00000467302 GATA2P23769 480 aaPredicted RBP11.96□□□□□ -0.49
PRPF38B-204ENST00000467302 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.49
PRPF38B-204ENST00000467302 ICE1Q9Y2F5 2266 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 RNASE2P10153 161 aaKnown RBP11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 CDKN1AP38936 164 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 CCL8P80075 99 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 RTL8BQ17RB0 113 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 TMEM30BQ3MIR4 351 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 ZNF788Q6ZQV5 615 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 BAGE3Q86Y29 109 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 BAGE2Q86Y30 109 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 OR5AU1Q8NGC0 362 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 OR1L8Q8NGR8 309 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 OR5B3Q8NH48 314 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 ATG101Q9BSB4 218 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 RNASE7Q9H1E1 156 aaKnown RBP11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 SLC35D1Q9NTN3 355 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 BET1LQ9NYM9 111 aa11.96□□□□□ -0.5
PRPF38B-204ENST00000467302 A0A1W2PRE2 83 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 ISLRO14498 428 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 MT-ND6P03923 174 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 MLANAQ16655 118 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 TMEM136Q6ZRR5 245 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 FAM216BQ8N7L0 139 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 IGF2BP2-AS1Q96M15 143 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 CCL13Q99616 98 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 SLC25A33Q9BSK2 321 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 GNB4Q9HAV0 340 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 ZNRD1Q9P1U0 126 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 PCNX1Q96RV3 2341 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 TANC2Q9HCD6 1990 aa11.95□□□□□ -0.5
PRPF38B-204ENST00000467302 PSMB11A5LHX3 300 aa11.94□□□□□ -0.5
PRPF38B-204ENST00000467302 OR7C2O60412 319 aa11.94□□□□□ -0.5
PRPF38B-204ENST00000467302 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
PRPF38B-204ENST00000467302 CHRNB4P30926 498 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms