RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 C12orf45Q8N5I9 185 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-204ENST00000463487 UXS1Q8NBZ7 420 aa15.26■□□□□ 0.03
COL9A3-204ENST00000463487 SLC24A4Q8NFF2 622 aa15.26■□□□□ 0.03
COL9A3-204ENST00000463487 CIB3Q96Q77 187 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-204ENST00000463487 SEC22CQ9BRL7 303 aa15.26■□□□□ 0.03
COL9A3-204ENST00000463487 DMRT1Q9Y5R6 373 aa15.26■□□□□ 0.03
COL9A3-204ENST00000463487 TRRAPQ9Y4A5 3859 aa15.26■□□□□ 0.03
COL9A3-204ENST00000463487 MFSD2BA6NFX1 497 aa15.25■□□□□ 0.03
COL9A3-204ENST00000463487 OVOL1O14753 267 aa15.25■□□□□ 0.03
COL9A3-204ENST00000463487 GGCTO75223 188 aaKnown RBP15.25■□□□□ 0.03
COL9A3-204ENST00000463487 ARL3P36405 182 aa15.25■□□□□ 0.03
COL9A3-204ENST00000463487 SLURP1P55000 103 aa15.25■□□□□ 0.03
COL9A3-204ENST00000463487 CLEC19AQ6UXS0 136 aa15.25■□□□□ 0.03
COL9A3-204ENST00000463487 PINX1Q96BK5 328 aaKnown RBP15.25■□□□□ 0.03
COL9A3-204ENST00000463487 MARVELD1Q9BSK0 173 aa15.25■□□□□ 0.03
COL9A3-204ENST00000463487 RBKSQ9H477 322 aa15.25■□□□□ 0.03
COL9A3-204ENST00000463487 C21orf62Q9NYP8 219 aa15.25■□□□□ 0.03
COL9A3-204ENST00000463487 U3KQ87 197 aa15.25■□□□□ 0.03
COL9A3-204ENST00000463487 RPS10-NUDT3A0A1W2PQS6 291 aa15.24■□□□□ 0.03
COL9A3-204ENST00000463487 WRBO00258 174 aa15.24■□□□□ 0.03
COL9A3-204ENST00000463487 SCGB2A1O75556 95 aa15.24■□□□□ 0.03
COL9A3-204ENST00000463487 IFNA10P01566 189 aa15.24■□□□□ 0.03
COL9A3-204ENST00000463487 IGHV3-23P01764 117 aa15.24■□□□□ 0.03
COL9A3-204ENST00000463487 RNASE2P10153 161 aaKnown RBP15.24■□□□□ 0.03
COL9A3-204ENST00000463487 NPY1RP25929 384 aa15.24■□□□□ 0.03
COL9A3-204ENST00000463487 MFAP2P55001 183 aa15.24■□□□□ 0.03
COL9A3-204ENST00000463487 ATP5IP56385 69 aaPredicted RBP15.24■□□□□ 0.03
COL9A3-204ENST00000463487 RPP30P78346 268 aaKnown RBP15.24■□□□□ 0.03
COL9A3-204ENST00000463487 ZNF502Q8TBZ5 544 aa15.24■□□□□ 0.03
COL9A3-204ENST00000463487 DCUN1D4Q92564 292 aa15.24■□□□□ 0.03
COL9A3-204ENST00000463487 CCDC140Q96MF4 163 aa15.24■□□□□ 0.03
COL9A3-204ENST00000463487 SNRPGP15A8MWD9 76 aa15.23■□□□□ 0.03
COL9A3-204ENST00000463487 MFAP4P55083 255 aa15.23■□□□□ 0.03
COL9A3-204ENST00000463487 IAH1Q2TAA2 248 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-204ENST00000463487 BSXQ3C1V8 233 aa15.23■□□□□ 0.03
COL9A3-204ENST00000463487 C2orf83Q53S99 150 aa15.23■□□□□ 0.03
COL9A3-204ENST00000463487 C9orf66Q5T8R8 295 aa15.23■□□□□ 0.03
COL9A3-204ENST00000463487 SPSB3Q6PJ21 355 aa15.23■□□□□ 0.03
COL9A3-204ENST00000463487 SCARB1Q8WTV0 552 aa15.23■□□□□ 0.03
COL9A3-204ENST00000463487 DLX4Q92988 240 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-204ENST00000463487 BSCL2Q96G97 398 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-204ENST00000463487 TXN2Q99757 166 aa15.23■□□□□ 0.03
COL9A3-204ENST00000463487 ELOVL1Q9BW60 279 aa15.23■□□□□ 0.03
COL9A3-204ENST00000463487 ZMAT5Q9UDW3 170 aaKnown RBP15.23■□□□□ 0.03
COL9A3-204ENST00000463487 S4R3C0 116 aa15.23■□□□□ 0.03
COL9A3-204ENST00000463487 C5orf51A6NDU8 294 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 K7EIM0 57 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 BMPR1BO00238 502 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 SYNGR2O43760 224 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 MT-CO2P00403 227 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 TRBV12-3P01733 135 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 CLEC3BP05452 202 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 IGLL1P15814 213 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 GPR183P32249 361 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 OPRK1P41145 380 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 NKX2-1P43699 371 aaPredicted RBP15.22■□□□□ 0.03
COL9A3-204ENST00000463487 DCTN2Q13561 401 aaKnown RBP15.22■□□□□ 0.03
COL9A3-204ENST00000463487 Q56UQ5 140 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 C1QL4Q86Z23 238 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 UBAC2Q8NBM4 344 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 RNASEH2CQ8TDP1 164 aaKnown RBP15.22■□□□□ 0.03
COL9A3-204ENST00000463487 PEMTQ9UBM1 199 aa15.22■□□□□ 0.03
COL9A3-204ENST00000463487 FAM25EA8MYX2 175 aa15.21■□□□□ 0.03
COL9A3-204ENST00000463487 SEC14L6B5MCN3 397 aa15.21■□□□□ 0.03
COL9A3-204ENST00000463487 PPP5D1E7EU14 171 aa15.21■□□□□ 0.03
COL9A3-204ENST00000463487 I3L2K1 104 aa15.21■□□□□ 0.03
COL9A3-204ENST00000463487 INSL3P51460 131 aa15.21■□□□□ 0.03
COL9A3-204ENST00000463487 RAB11AP62491 216 aa15.21■□□□□ 0.03
COL9A3-204ENST00000463487 FAM106AQ4KMX7 169 aa15.21■□□□□ 0.03
COL9A3-204ENST00000463487 ETFRF1Q6IPR1 90 aa15.21■□□□□ 0.03
COL9A3-204ENST00000463487 GSKIPQ9P0R6 139 aa15.21■□□□□ 0.03
COL9A3-204ENST00000463487 MGAM2Q2M2H8 2515 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 IGHV3-21A0A0B4J1V1 117 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 MPTX1A8MV57 137 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 NUPL2O15504 423 aaKnown RBP15.2■□□□□ 0.02
COL9A3-204ENST00000463487 NPBWR1P48145 328 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 SYNJ2BPP57105 145 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 KLF5Q13887 457 aaPredicted RBP15.2■□□□□ 0.02
COL9A3-204ENST00000463487 SAMD5Q5TGI4 173 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 PVRIGQ6DKI7 326 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 ACSM6Q6P461 480 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 GSG1LQ6UXU4 331 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 OR4D5Q8NGN0 318 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 OR4C12Q96R67 309 aa15.2■□□□□ 0.02
COL9A3-204ENST00000463487 OR2T8A6NH00 312 aa15.19■□□□□ 0.02
COL9A3-204ENST00000463487 TGOLN2O43493 480 aa15.19■□□□□ 0.02
COL9A3-204ENST00000463487 GNG7O60262 68 aa15.19■□□□□ 0.02
COL9A3-204ENST00000463487 SCGB1D2O95969 90 aa15.19■□□□□ 0.02
COL9A3-204ENST00000463487 IFNA4P05014 189 aa15.19■□□□□ 0.02
COL9A3-204ENST00000463487 IAPPP10997 89 aa15.19■□□□□ 0.02
COL9A3-204ENST00000463487 FCGR2BP31994 310 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-204ENST00000463487 ID3Q02535 119 aa15.19■□□□□ 0.02
COL9A3-204ENST00000463487 OXLD1Q5BKU9 147 aa15.19■□□□□ 0.02
COL9A3-204ENST00000463487 ZBTB8BQ8NAP8 495 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-204ENST00000463487 MAGT1Q9H0U3 335 aa15.19■□□□□ 0.02
COL9A3-204ENST00000463487 VWFP04275 2813 aa15.19■□□□□ 0.02
COL9A3-204ENST00000463487 G3V4G9 280 aa15.18■□□□□ 0.02
COL9A3-204ENST00000463487 CCSO14618 274 aa15.18■□□□□ 0.02
COL9A3-204ENST00000463487 SLC25A4P12235 298 aa15.18■□□□□ 0.02
COL9A3-204ENST00000463487 RELQ04864 619 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms