RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 MGST3O14880 152 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 GPR6P46095 362 aaPredicted RBP11.23□□□□□ -0.61
PTPRE-204ENST00000455661 LOXL3P58215 753 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 UBE2L3P68036 154 aaKnown RBP11.23□□□□□ -0.61
PTPRE-204ENST00000455661 RHOGP84095 191 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 NUDT10Q8NFP7 164 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 NUDT11Q96G61 164 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 VPS25Q9BRG1 176 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 WASHC3Q9Y3C0 194 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 AMMECR1Q9Y4X0 333 aaPredicted RBP11.23□□□□□ -0.61
PTPRE-204ENST00000455661 C21orf140B9A014 251 aa11.22□□□□□ -0.61
PTPRE-204ENST00000455661 F2RL2O00254 374 aa11.22□□□□□ -0.61
PTPRE-204ENST00000455661 HIST1H1EP10412 219 aaKnown RBP11.22□□□□□ -0.61
PTPRE-204ENST00000455661 CAMPP49913 170 aa11.22□□□□□ -0.61
PTPRE-204ENST00000455661 MEOX1P50221 254 aa11.22□□□□□ -0.61
PTPRE-204ENST00000455661 ATP5IP56385 69 aaPredicted RBP11.22□□□□□ -0.61
PTPRE-204ENST00000455661 MPV17L2Q567V2 206 aa11.22□□□□□ -0.61
PTPRE-204ENST00000455661 GDF5OSQ5U4N7 250 aa11.22□□□□□ -0.61
PTPRE-204ENST00000455661 LINC00696Q6ZRV3 163 aa11.22□□□□□ -0.61
PTPRE-204ENST00000455661 ATP5L2Q7Z4Y8 100 aa11.22□□□□□ -0.61
PTPRE-204ENST00000455661 SNRNP40Q96DI7 357 aaKnown RBP11.22□□□□□ -0.61
PTPRE-204ENST00000455661 HSBP1L1C9JCN9 74 aa11.21□□□□□ -0.61
PTPRE-204ENST00000455661 LYZL6O75951 148 aa11.21□□□□□ -0.61
PTPRE-204ENST00000455661 TOX4O94842 621 aa11.21□□□□□ -0.61
PTPRE-204ENST00000455661 IGHV1-2P23083 117 aa11.21□□□□□ -0.61
PTPRE-204ENST00000455661 MZT1Q08AG7 82 aa11.21□□□□□ -0.61
PTPRE-204ENST00000455661 OR2T6Q8NHC8 308 aa11.21□□□□□ -0.61
PTPRE-204ENST00000455661 SSBP4Q9BWG4 385 aaPredicted RBP11.21□□□□□ -0.61
PTPRE-204ENST00000455661 IGKV1OR2-108A0A075B7D4 117 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 CBY3A6NI87 242 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 PRCDQ00LT1 54 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 CR1LQ2VPA4 569 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 PMS2CLQ68D20 193 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 C12orf54Q6X4T0 127 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 MOB3BQ86TA1 216 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.21□□□□□ -0.62
PTPRE-204ENST00000455661 ST6GALNAC6Q969X2 333 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 ADTRPQ96IZ2 230 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 LINC00479Q96M42 142 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 RAB9BQ9NP90 201 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 CLEC5AQ9NY25 188 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 ZNF257Q9Y2Q1 563 aa11.21□□□□□ -0.62
PTPRE-204ENST00000455661 HIGD1CA8MV81 97 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 KLRC4-KLRK1H3BQV0 150 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 NUDT3O95989 172 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 MYOD1P15172 320 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 PRR27Q6MZM9 219 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 SLC25A34Q6PIV7 304 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 DEFB127Q9H1M4 99 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 CST9LQ9H4G1 147 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 C1RLQ9NZP8 487 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 KLF13Q9Y2Y9 288 aaPredicted RBP11.2□□□□□ -0.62
PTPRE-204ENST00000455661 PCSK5Q92824 1860 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 DNAJC13O75165 2243 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 M0QZ24 198 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 TAX1BP3O14907 124 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 CRXO43186 299 aaPredicted RBP11.2□□□□□ -0.62
PTPRE-204ENST00000455661 CER1O95813 267 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 HOXC12P31275 282 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 CA7P43166 264 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 FABP6P51161 128 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 C2orf83Q53S99 150 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 LDLRAD2Q5SZI1 272 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 SPATA12Q7Z6I5 190 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 KIR3DL3Q8N743 410 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 SLC25A2Q9BXI2 301 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 TMEM191AQ9H0A3 160 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 CALYQ9NYX4 217 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 FZR1Q9UM11 496 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 RNF24Q9Y225 148 aa11.2□□□□□ -0.62
PTPRE-204ENST00000455661 CEP290O15078 2479 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 PEX7O00628 323 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 REG1BP48304 166 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 OCIAD2Q56VL3 154 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 BVES-AS1Q5T3Y7 98 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 ASPHD1Q5U4P2 390 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 C1orf229Q6ZS94 237 aaPredicted RBP11.19□□□□□ -0.62
PTPRE-204ENST00000455661 OR9G1Q8NH87 305 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 CHCHD1Q96BP2 118 aaKnown RBP11.19□□□□□ -0.62
PTPRE-204ENST00000455661 IGKV1D-17A0A075B6S4 117 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 TMEM265A0A087WTH1 108 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 TRAV5A0A0B4J249 113 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 SYS1-DBNDD2H3BUS1 97 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 SAA2P0DJI9 122 aaPredicted RBP11.19□□□□□ -0.62
PTPRE-204ENST00000455661 POU2AF1Q16633 256 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 ERASQ7Z444 233 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 DEFB125Q8N687 156 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 LEAP2Q969E1 77 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 FAM167A-AS1Q96KT0 104 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 ZPBPQ9BS86 351 aa11.19□□□□□ -0.62
PTPRE-204ENST00000455661 UPK2O00526 184 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 LEPROTL1O95214 131 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 CT45A1Q5HYN5 189 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 ZNF329Q86UD4 541 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 CT45A3Q8NHU0 189 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 PAXXQ9BUH6 204 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 AGFG2O95081 481 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 PSG1P11464 419 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 HBBP68871 147 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms