RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TRAV38-1A0A0B4J264 116 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 IGKV1-9A0A0C4DH69 117 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 MSMBP08118 114 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 MSNP26038 577 aaKnown RBP1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 PSMB8P28062 276 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 GNG5P63218 68 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 DR1Q01658 176 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 LYZL1Q6UWQ5 148 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 BRD3OSQ6XYD6 125 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 LCA10Q71F78 164 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 OR5J2Q8NH18 312 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 PFN4Q8NHR9 129 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 AMMECR1Q9Y4X0 333 aaPredicted RBP1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 SCAF11Q99590 1463 aaKnown RBP1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 MYH11P35749 1972 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 KIF24Q5T7B8 1368 aa1.98□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRBV19A0A075B6N1 114 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 TMSB15BA0A087X1C1 80 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 IGHV1-18A0A0C4DH31 117 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 A0A0G2JQZ4 141 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 IRGMA1A4Y4 181 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 RFPL4AA6NLU0 287 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 RFPL4AL1F8VTS6 287 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 H7C2G1 150 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 IFNA10P01566 189 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 SHBGP04278 402 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 RPS4Y1P22090 263 aaKnown RBP1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 PIGPP57054 158 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 KRTAP10-1P60331 282 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 NCALDP61601 193 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 RHOBP62745 196 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 ZNF90Q03938 601 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 LINC01554Q52M75 96 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 SPANXN3Q5MJ09 141 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 TRIQKQ629K1 86 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 BPIFA4PQ86YQ2 179 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 CLVS1Q8IUQ0 354 aaPredicted RBP1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 RPP25LQ8N5L8 163 aaKnown RBP1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 ADAT3Q96EY9 351 aaPredicted RBP1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 PCBD2Q9H0N5 130 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 TVP23BQ9NYZ1 205 aa1.97□□□□□ -2.09
HMGN3P1-201ENST00000453847 PTPRBP23467 1997 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 MYH7BA7E2Y1 1941 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 IGKV3D-11A0A0A0MRZ8 115 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 A0A0D9SEW6 157 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 FNDC10F2Z333 226 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 H0YJX3 145 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 RPSAP08865 295 aaKnown RBP1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 SPI1P17947 270 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 ZNF181Q2M3W8 571 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 PABPC1L2AQ5JQF8 200 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 C3orf33Q6P1S2 294 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 OR13C6PQ8NH95 151 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 SPACA4Q8TDM5 124 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 ANP32BQ92688 251 aaKnown RBP1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 C2orf50Q96LR7 162 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 CHST6Q9GZX3 395 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 TMEM133Q9H2Q1 129 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 RNF122Q9H9V4 155 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 MRPL40Q9NQ50 206 aaKnown RBP1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 ERGIC3Q9Y282 383 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 SLC35A3Q9Y2D2 325 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 V9GYQ6 96 aa1.96□□□□□ -2.1
HMGN3P1-201ENST00000453847 IGHV3-64A0A075B6Q5 118 aa1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 ZNF860A6NHJ4 632 aa1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 CREBL2O60519 120 aaPredicted RBP1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 WFDC5Q8TCV5 224 aa1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 CXCL16Q9H2A7 254 aa1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 TIMM9Q9Y5J7 89 aa1.95□□□□□ -2.1
HMGN3P1-201ENST00000453847 G3V2T6 193 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 J3QRK9 145 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 PGLYRP1O75594 196 aaPredicted RBP1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 PEBP1P30086 187 aaKnown RBP1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 SERPINB1P30740 379 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 AQP4P55087 323 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 SNCBQ16143 134 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 MIR17HGQ75NE6 70 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 KTN1-AS1Q86SY8 53 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 DCANP1Q8TF63 244 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 DNAJC9Q8WXX5 260 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 DNAJC30Q96LL9 226 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 SH3BGRL3Q9H299 93 aa1.94□□□□□ -2.1
HMGN3P1-201ENST00000453847 MED1Q15648 1581 aaPredicted RBP1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 NCKAP5O14513 1909 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 CCDC88CQ9P219 2028 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 FMN1Q68DA7 1419 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 NUMA1Q14980 2115 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 PLXNA3P51805 1871 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 SMARCA4P51532 1647 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 TRBV10-2A0A0K0K1G8 114 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 OR51F1A6NGY5 319 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 C1orf196B1AJZ1 125 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 SLC22A1O15245 554 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 PIAS1O75925 651 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 CASP1P29466 404 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 RNASE4P34096 147 aaKnown RBP1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 PHBP35232 272 aa1.93□□□□□ -2.1
HMGN3P1-201ENST00000453847 EIF2B2P49770 351 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms