RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 IGLV2-23P01705 113 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 OPN1MWP04001 364 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 OPN1MW2P0DN77 364 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 OPN1MW3P0DN78 364 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 RAB13P51153 203 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 ATP5IP56385 69 aaPredicted RBP8.63□□□□□ -1.03
PKP4-206ENST00000452162 HABP2Q14520 560 aaPredicted RBP8.63□□□□□ -1.03
PKP4-206ENST00000452162 C2orf83Q53S99 150 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 MIC13Q5XKP0 118 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 WDR25Q64LD2 544 aaPredicted RBP8.63□□□□□ -1.03
PKP4-206ENST00000452162 FAM24BQ8N5W8 94 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 OR4C13Q8NGP0 309 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 OR4A5Q8NH83 315 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 TMEM167AQ8TBQ9 72 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 KCNIP2Q9NS61 270 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 WASHC3Q9Y3C0 194 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 ZNF727A8MUV8 499 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 B4DEV8 164 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 TMEM250H0YL14 139 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 RNASE2P10153 161 aaKnown RBP8.63□□□□□ -1.03
PKP4-206ENST00000452162 RAB5AP20339 215 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 RPL8P62917 257 aaKnown RBP8.63□□□□□ -1.03
PKP4-206ENST00000452162 PNRC1Q12796 327 aaPredicted RBP8.63□□□□□ -1.03
PKP4-206ENST00000452162 TEPPQ6URK8 271 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 TGIF2LXQ8IUE1 241 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 OR1L8Q8NGR8 309 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 NEIL1Q96FI4 390 aaPredicted RBP8.63□□□□□ -1.03
PKP4-206ENST00000452162 PATZ1Q9HBE1 687 aaKnown RBP8.63□□□□□ -1.03
PKP4-206ENST00000452162 SDF2L1Q9HCN8 221 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 NDUFA4L2Q9NRX3 87 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 ZFHX3Q15911 3703 aa8.63□□□□□ -1.03
PKP4-206ENST00000452162 NSD1Q96L73 2696 aaPredicted RBP8.62□□□□□ -1.03
PKP4-206ENST00000452162 hCG_1809904A0A1W2PP81 198 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 A0A1W2PR64 198 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 A0A1W2PRV1 198 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 INS-IGF2F8WCM5 200 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 C8orf46Q8TAG6 207 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 TNFRSF14Q92956 283 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 MALSU1Q96EH3 234 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 SIRT7Q9NRC8 400 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 HIVEP2P31629 2446 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 IGHV2-26A0A0B4J1V2 119 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 IGLV1-47P01700 117 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 RBP4P02753 201 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 IL3RAP26951 378 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 KRTAP1-1Q07627 177 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 ZFP82Q8N141 532 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 OR10W1Q8NGF6 305 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 VSTM2AQ8TAG5 236 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 SSMEM1Q8WWF3 244 aa8.62□□□□□ -1.03
PKP4-206ENST00000452162 A0A1W2PPV4 95 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 CXorf65A6NEN9 183 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 CGB1A6NKQ9 187 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 PAGE4O60829 102 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 LY6G6DO95868 133 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 MC5RP33032 325 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 RPL29P47914 159 aaKnown RBP8.61□□□□□ -1.03
PKP4-206ENST00000452162 S100A12P80511 92 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 PRR20EP86478 221 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 PRR20CP86479 221 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 PRR20DP86480 221 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 PRR20BP86481 221 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 PRR20AP86496 221 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 Q71RC1 249 aaPredicted RBP8.61□□□□□ -1.03
PKP4-206ENST00000452162 STPG3Q8N7X2 389 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 TIMD4Q96H15 378 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 COMMD5Q9GZQ3 224 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 SETD2Q9BYW2 2564 aaPredicted RBP8.61□□□□□ -1.03
PKP4-206ENST00000452162 C1orf196B1AJZ1 125 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 E7EUB6 86 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 STAG3L2P0CL84 134 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 STAG3L3P0CL85 134 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 DLX1P56177 255 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 RAB5BP61020 215 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 SSTP61278 116 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 MRGPRG-AS1Q2M3A8 158 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 HLA-DRB5Q30154 266 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 CYP2G1PQ6ZSU1 146 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 TMEM144Q7Z5S9 345 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 SMIM7Q9BQ49 75 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 SAV1Q9H4B6 383 aaPredicted RBP8.61□□□□□ -1.03
PKP4-206ENST00000452162 ZNF430Q9H8G1 570 aaPredicted RBP8.61□□□□□ -1.03
PKP4-206ENST00000452162 NAT8Q9UHE5 227 aa8.61□□□□□ -1.03
PKP4-206ENST00000452162 TNCP24821 2201 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 FN1P02751 2386 aaKnown RBP8.6□□□□□ -1.03
PKP4-206ENST00000452162 NIPBLQ6KC79 2804 aaeCLIP8.6□□□□□ -1.035e-6■□□□□ 8.1
PKP4-206ENST00000452162 PPIAL4CA0A0B4J2A2 164 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 LINC00869P0C866 280 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 PPIAL4GP0DN37 164 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 LMO4P61968 165 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 RAB31Q13636 194 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 MOB3BQ86TA1 216 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 LY6G5BQ8NDX9 201 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 OR8B3Q8NGG8 313 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 OR4F5Q8NH21 305 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 C2CD4CQ8TF44 421 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 RITA1Q96K30 269 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 OR4F4Q96R69 305 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 OR8B2Q96RD0 313 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 BIN3Q9NQY0 253 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms