RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	IGHG3	P01860	377 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	APCS	P02743	223 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	ZNF688	P0C7X2	276 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	FCGR2A	P12318	317 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	NPPC	P23582	126 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	MEOX1	P50221	254 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	TEPP	Q6URK8	271 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	TRPT1	Q86TN4	253 aa	Known RBP	5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	MMD2	Q8IY49	270 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	OR4X2	Q8NGF9	303 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	PPDPFL	Q8WWR9	84 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	SMIM14	Q96QK8	99 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	FBXL15	Q9H469	300 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	TCF19	Q9Y242	345 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	KLF12	Q9Y4X4	402 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	YTHDF2	Q9Y5A9	579 aa	Known RBP	5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	SCN2A	Q99250	2005 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	CACNA1C	Q13936	2221 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	CRYM-AS1	A6NIL9	109 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	C11orf94	C9JXX5	98 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329		E9PLD3	99 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	C11orf98	E9PRG8	122 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	NDUFB4	O95168	129 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	BCL3	P20749	454 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	KIR2DS2	P43631	304 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	FBXW4	P57775	412 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	RPS16	P62249	146 aa	Known RBP	5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	LY6D	Q14210	128 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	VWC2	Q2TAL6	325 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	ZC2HC1B	Q5TFG8	222 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	C1QL2	Q7Z5L3	287 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	DCAF4L2	Q8NA75	395 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	GATD1	Q8NB37	220 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	IL17D	Q8TAD2	202 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	TNFRSF19	Q9NS68	423 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	NHP2	Q9NX24	153 aa	Known RBP	5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	C1RL	Q9NZP8	487 aa		5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	F11R	Q9Y624	299 aa	Known RBP	5.61	□□□□□ -1.51
TRIM6-205	ENST00000445329	MYO15A	Q9UKN7	3530 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	MUC22	E2RYF6	1773 aa	Predicted RBP	5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	ZNF561-AS1	K7EIQ3	104 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	LEPROTL1	O95214	131 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	CRYGD	P07320	174 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	CD3E	P07766	207 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	FGF6	P10767	208 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	ARL16	Q0P5N6	197 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	ZNF816	Q0VGE8	651 aa	Predicted RBP	5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	TMEM196	Q5HYL7	178 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	MRPL2	Q5T653	305 aa	Known RBP	5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	TSPO2	Q5TGU0	170 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	HLA-DQA1	Q5Y7H0	255 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	SLC25A22	Q9H936	323 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	DHDH	Q9UQ10	334 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	SCN3A	Q9NY46	2000 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	PGLYRP1	O75594	196 aa	Predicted RBP	5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	ZFAND5	O76080	213 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	HLA-DQA1	P01909	254 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	NMU	P48645	174 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	FXYD2	P54710	66 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	RPS28	P62857	69 aa	Known RBP	5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	FAM27E3	Q08E93	113 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	ARFRP1	Q13795	201 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	MS4A18	Q3C1V0	323 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329		Q6Q795	121 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	IL17REL	Q6ZVW7	336 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	ANKRD37	Q7Z713	158 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	OR13H1	Q8NG92	308 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	DEC1	Q9P2X7	70 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	MRPS17	Q9Y2R5	130 aa	Known RBP	5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	NCOA6	Q14686	2063 aa	Predicted RBP	5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	LAMA1	P25391	3075 aa		5.6	□□□□□ -1.51
TRIM6-205	ENST00000445329	FAM236D	A0A1B0GTK5	79 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	IGLL5	B9A064	214 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329		K7EQS6	105 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	ACTL6B	O94805	426 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	FAM236C	P0DP71	79 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	NPPB	P16860	134 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	RPS4X	P62701	263 aa	Known RBP	5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	GNB1	P62873	340 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	TMEM86B	Q8N661	226 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	LRRC29	Q8WV35	223 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	RDH5	Q92781	318 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	CARD19	Q96LW7	228 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	GPHA2	Q96T91	129 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	FAM173A	Q9BQD7	235 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	OR10A2	Q9H208	303 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	PROCR	Q9UNN8	238 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	PCDH15	Q96QU1	1955 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	TMEM89	A2RUT3	159 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	GGTLC3	B5MD39	225 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329		K7ESF4	209 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	DNPH1	O43598	174 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	NAPSA	O96009	420 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	AMY1A	P04745	511 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	PLA2G5	P39877	138 aa		5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	RPL31	P62899	125 aa	Known RBP	5.59	□□□□□ -1.51
TRIM6-205	ENST00000445329	TMEM187	Q14656	261 aa		5.59	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms