RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 PIGPP57054 158 aa3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 CDC42P60953 191 aa3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 LTC4SQ16873 150 aa3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 LGALSLQ3ZCW2 172 aaPredicted RBP3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 KRTAP11-1Q8IUC1 163 aa3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 CLVS1Q8IUQ0 354 aaPredicted RBP3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 FAM24BQ8N5W8 94 aa3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 NUP35Q8NFH5 326 aa3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 MALSU1Q96EH3 234 aa3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 TMEM70Q9BUB7 260 aa3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 TUBGCP6Q96RT7 1819 aa3.04□□□□□ -1.92
TM9SF3-202ENST00000443638 MAGI3Q5TCQ9 1506 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 NLRC5Q86WI3 1866 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 TONSLQ96HA7 1378 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 TRAPPC2LH3BP13 241 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 NPYP01303 97 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 ZNF22P17026 224 aaPredicted RBP3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 LPAR6P43657 344 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 PSMD8P48556 350 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 FXYD7P58549 80 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 ZNF117Q03924 483 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 RPL18Q07020 188 aaKnown RBP3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 RHEBQ15382 184 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 NDUFA5Q16718 116 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 SAMD13Q5VXD3 122 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 C2orf91Q6ZV80 131 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 LCA10Q71F78 164 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 ZNF285Q96NJ3 590 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 IMUPQ9GZP8 106 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 MCTS1Q9ULC4 181 aaKnown RBP3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 CFAP43Q8NDM7 1665 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 PREX1Q8TCU6 1659 aa3.03□□□□□ -1.92
TM9SF3-202ENST00000443638 FMN1Q68DA7 1419 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 UHRF1BP1Q6BDS2 1440 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 IGLV4-60A0A075B6I1 120 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 RIIAD1A6NNX1 92 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 CD24P25063 80 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 XCL1P47992 114 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 TPI1P60174 286 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 SCGB2B2Q4G0G5 96 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 NOXRED1Q6NXP6 359 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 ST6GALNAC3Q8NDV1 305 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 OR5C1Q8NGR4 320 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 PFDN5Q99471 154 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 EFCAB11Q9BUY7 163 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 TMEM133Q9H2Q1 129 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 ASF1BQ9NVP2 202 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 RBM7Q9Y580 266 aaKnown RBP3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 R4GN34 69 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 REREQ9P2R6 1566 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 SLIT3O75094 1523 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 ABCA10Q8WWZ4 1543 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 ZNF646O15015 1829 aaPredicted RBP3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 UACAQ9BZF9 1416 aa3.02□□□□□ -1.93
TM9SF3-202ENST00000443638 ZCCHC11Q5TAX3 1644 aaKnown RBP3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 FRMPD1Q5SYB0 1578 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 UBFD1O14562 309 aaKnown RBP3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 ZNF73O43830 326 aaPredicted RBP3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 GZMBP10144 247 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 HLA-DMBP28068 263 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 BIKQ13323 160 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 MIAQ16674 131 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 KTN1-AS1Q86SY8 53 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 RNF182Q8N6D2 247 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 C1orf64Q8NEQ6 169 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 CYYR1Q96J86 154 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 RSPO3Q9BXY4 272 aaPredicted RBP3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 TUBA4BQ9H853 241 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 KDM5BQ9UGL1 1544 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 WDR7Q9Y4E6 1490 aa3.01□□□□□ -1.93
TM9SF3-202ENST00000443638 RFX7Q2KHR2 1363 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 LRCOL1A6NCL2 159 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 E7EQ34 232 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 CPSF4O95639 269 aaKnown RBP3□□□□□ -1.93
TM9SF3-202ENST00000443638 PSMB8P28062 276 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 HIST1H4AP62805 103 aaKnown RBP3□□□□□ -1.93
TM9SF3-202ENST00000443638 AKR1C1Q04828 323 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 DNLZQ5SXM8 178 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 OR52R1Q8NGF1 315 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 TERB2Q8NHR7 220 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 NUBP2Q9Y5Y2 271 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 UHRF1BP1LA0JNW5 1464 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 TTC37Q6PGP7 1564 aa3□□□□□ -1.93
TM9SF3-202ENST00000443638 ROCK2O75116 1388 aaKnown RBP3□□□□□ -1.93
TM9SF3-202ENST00000443638 ATG2BQ96BY7 2078 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 A0A0D9SEW6 157 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 DUXBA0A1W2PPF3 345 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 A0A1W2PQD3 144 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 ARL5CA6NH57 179 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 RFPL4AA6NLU0 287 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 FABP5P3A8MUU1 101 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 MIF4GDA9UHW6 222 aaKnown RBP2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 RFPL4AL1F8VTS6 287 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 C19orf84I3L1E1 186 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 CST8O60676 142 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 SMIM24O75264 130 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 CASP1P29466 404 aa2.99□□□□□ -1.93
TM9SF3-202ENST00000443638 MEF2BQ02080 365 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms