RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 C19orf24Q9BVV8 132 aa14.09□□□□□ -0.15
SMARCA4-203ENST00000429416 MRPL32Q9BYC8 188 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-203ENST00000429416 TMPRSS5Q9H3S3 457 aa14.09□□□□□ -0.15
SMARCA4-203ENST00000429416 PRTN3P24158 256 aa14.08□□□□□ -0.15
SMARCA4-203ENST00000429416 PAX8Q06710 450 aa14.08□□□□□ -0.15
SMARCA4-203ENST00000429416 SRSF7Q16629 238 aaKnown RBP eCLIP14.08□□□□□ -0.15
SMARCA4-203ENST00000429416 FAM53AQ6NSI3 398 aaPredicted RBP14.08□□□□□ -0.15
SMARCA4-203ENST00000429416 C9orf62Q8N4C0 152 aa14.08□□□□□ -0.15
SMARCA4-203ENST00000429416 FAM89BQ8N5H3 189 aa14.08□□□□□ -0.15
SMARCA4-203ENST00000429416 ANAPC16Q96DE5 110 aa14.08□□□□□ -0.15
SMARCA4-203ENST00000429416 A0A0B4J293 547 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 C15orf61A6NNL5 157 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 ZNF56Q15929 161 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 DMRTC2Q8IXT2 367 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 RTBDNQ9BSG5 229 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 IGF2RP11717 2491 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 NPIPB6E9PJ23 425 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 SOD3P08294 240 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 NBEAP1P0C6P0 100 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 C15orf32Q32M92 178 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 TEX38Q6PEX7 206 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 IGFL2Q6UWQ7 119 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 LOC389332A0A1B0GUA5 103 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 TMEM262E9PQX1 116 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 ZNF253O75346 499 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 IER3P46695 156 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 NR2C2APQ86WQ0 139 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 IGKV1D-8A0A087WSZ0 117 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 FAM74A3Q4VXF1 159 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 ZNF841Q6ZN19 808 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 Q6ZN92 141 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 GALNT14Q96FL9 552 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 RPRMQ9NS64 109 aa14.08□□□□□ -0.16
SMARCA4-203ENST00000429416 PTTG1IPP53801 180 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 H2BFSP57053 126 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 OR10W1Q8NGF6 305 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 TBL2Q9Y4P3 447 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 CSPG4Q6UVK1 2322 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 ISLRO14498 428 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 SH3BGRL3Q9H299 93 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 TRGV2A0A075B6R0 118 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 CBY3A6NI87 242 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 IBA57Q5T440 356 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 ZNF324BQ6AW86 544 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 PIP4P2Q8N4L2 257 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 ZNF600Q6ZNG1 722 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 CACNG8Q8WXS5 425 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 NRGNQ92686 78 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 FBLN5Q9UBX5 448 aa14.07□□□□□ -0.16
SMARCA4-203ENST00000429416 MEF2BQ02080 365 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 RNF212Q495C1 297 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 AWAT1Q58HT5 328 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 TMEM167AQ8TBQ9 72 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 OR4C46A6NHA9 309 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 ETV2O00321 342 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 KLF17Q5JT82 389 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 FOXL2NBQ6ZUU3 175 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 H3BQ15 152 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 SMAGPQ0VAQ4 97 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 SMUG1Q53HV7 270 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 HLA-DRB1P01911 266 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 CXCL2P19875 107 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 OTX1P32242 354 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 TFF3Q07654 80 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 CYB561D1Q8N8Q1 229 aa14.06□□□□□ -0.16
SMARCA4-203ENST00000429416 C5orf64Q2M2E5 130 aa14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 SLC25A48Q6ZT89 311 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 COQ2Q96H96 371 aa14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 NPCDR1Q9BY65 106 aa14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 SONP18583 2426 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 RNF144BQ7Z419 303 aa14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 C5orf24Q7Z6I8 188 aa14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 KIR3DL3Q8N743 410 aa14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 ZNF503-AS2A6NEH8 195 aa14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 CRXO43186 299 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 PRSS8Q16651 343 aa14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 ZNF524Q96C55 264 aa14.05□□□□□ -0.16
SMARCA4-203ENST00000429416 RBFOX2O43251 390 aaKnown RBP eCLIP14.04□□□□□ -0.163e-7■■□□□ 14.3
SMARCA4-203ENST00000429416 DEFB113Q30KQ7 82 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 LEMD1Q68G75 181 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 OR52E5Q8NH55 327 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 RNF125Q96EQ8 232 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 GGCTO75223 188 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 FAM209BQ5JX69 171 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 TMEM42Q69YG0 159 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 AQP10Q96PS8 301 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 ATRXP46100 2492 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 EFNB1P98172 346 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 ISOC2Q96AB3 205 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 SCN8AQ9UQD0 1980 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 IGHV1-69DA0A0B4J2H0 117 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 IGHV1-69P01742 117 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 C19orf54Q5BKX5 351 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 EIF4E3Q8N5X7 224 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 ZMAT5Q9UDW3 170 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 ADAMTS9Q9P2N4 1935 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 CRISP2P16562 243 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 GCHFRP30047 84 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 DLX1P56177 255 aa14.04□□□□□ -0.16
SMARCA4-203ENST00000429416 WFDC12Q8WWY7 111 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms