RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 IQCF6A8MYZ5 107 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 HPRT1P00492 218 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 IGFBP2P18065 325 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 CRYBB3P26998 211 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 IQCJQ1A5X6 159 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 TIGITQ495A1 244 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 ZNF114Q8NC26 417 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 ST6GALNAC3Q8NDV1 305 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 COMMD5Q9GZQ3 224 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 GSX1Q9H4S2 264 aaPredicted RBP6.68□□□□□ -1.34
HPS4-205ENST00000429411 CALYQ9NYX4 217 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 ADGRG4Q8IZF6 3080 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 TRBV24-1A0A075B6N3 115 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 J3QR06 171 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 SIVA1O15304 175 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 FOXH1O75593 365 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 GNG4P50150 75 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 RHOBP62745 196 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 TNFAIP6P98066 277 aaPredicted RBP6.68□□□□□ -1.34
HPS4-205ENST00000429411 MLANAQ16655 118 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 DUX4L9Q6RFH8 374 aaPredicted RBP6.68□□□□□ -1.34
HPS4-205ENST00000429411 TEPPQ6URK8 271 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 FAM216BQ8N7L0 139 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 OR1L6Q8NGR2 347 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 OR4S2Q8NH73 311 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 TANC2Q9HCD6 1990 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 H3BTX0 84 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 CA2P00918 260 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 ADH4P08319 380 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 OR4A8P0C604 315 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 HCFC1P51610 2035 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 RPL19P84098 196 aaKnown RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 MZT1Q08AG7 82 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 STUMQ69YW2 141 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 PQLC2Q6ZP29 291 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 STPG3Q8N7X2 389 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 BEND2Q8NDZ0 799 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 BLNKQ8WV28 456 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 SNRNP40Q96DI7 357 aaKnown RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 SFRP2Q96HF1 295 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 BBC3Q96PG8 261 aaPredicted RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 HSPB9Q9BQS6 159 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 NPVFQ9HCQ7 196 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 MBNL3Q9NUK0 354 aaKnown RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 LOC102724200A0A096LPH7 203 aaPredicted RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 IGHV2OR16-5A0A0B4J2B6 119 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 A1L4Q6 167 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 C15orf62A8K5M9 175 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 PDE6DO43924 150 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 OR10J1P30954 320 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 DUTP33316 252 aaKnown RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 CAMPP49913 170 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 SRSF7Q16629 238 aaKnown RBP eCLIP6.67□□□□□ -1.34
HPS4-205ENST00000429411 ZADH2Q8N4Q0 377 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 RBMXL3Q8N7X1 1067 aaKnown RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 MDS2Q8NDY4 140 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 OCC1Q8TAD7 63 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 GLMPQ8WWB7 406 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 SSBP3Q9BWW4 388 aaPredicted RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 MGST3O14880 152 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 CXorf1O96002 111 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 REG1AP05451 166 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 PFN1P07737 140 aaKnown RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 IL6RP08887 468 aaPredicted RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 GZMBP10144 247 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 OPRK1P41145 380 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 KIR2DL2P43627 348 aaPredicted RBP6.67□□□□□ -1.34
HPS4-205ENST00000429411 TREML4Q6UXN2 200 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 MIR17HGQ75NE6 70 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 LINC01551Q86U37 167 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 OR10X1Q8NGY0 326 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 RAB1CQ92928 201 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 OR51B2Q9Y5P1 312 aa6.67□□□□□ -1.34
HPS4-205ENST00000429411 TRBV6-6A0A0A6YYG2 114 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 TCF21O43680 179 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 CA1P00915 261 aaPredicted RBP6.66□□□□□ -1.34
HPS4-205ENST00000429411 AMTP48728 403 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 ERVK11-1P61568 191 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 MORN2Q502X0 79 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 ZNF664Q8N3J9 261 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 RPRMLQ8N4K4 120 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 SIGLECL1Q8N7X8 197 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 RNF152Q8N8N0 203 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 CLCF1Q9UBD9 225 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 UTP20O75691 2785 aaKnown RBP6.66□□□□□ -1.34
HPS4-205ENST00000429411 SNAI2O43623 268 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 NPSP0C0P6 89 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 ORM2P19652 201 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 CHRNB4P30926 498 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 FAM27E3Q08E93 113 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 SPRNQ5BIV9 151 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 UTF1Q5T230 341 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 ATOH7Q8N100 152 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 RNASE7Q9H1E1 156 aaKnown RBP6.66□□□□□ -1.34
HPS4-205ENST00000429411 MALRD1Q5VYJ5 2156 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 IGHV1-18A0A0C4DH31 117 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 ZNF253O75346 499 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 NPPCP23582 126 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 GCHFRP30047 84 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 232.4 ms