RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CT55Q8WUE5 264 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 IL1F10Q8WWZ1 152 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 GALMQ96C23 342 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 GPR146Q96CH1 333 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 POM121L2Q96KW2 1035 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 IMMP2LQ96T52 175 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 HSD17B10Q99714 261 aaKnown RBP4.03□□□□□ -1.76
LINC00458-202ENST00000427299 RSG1Q9BU20 258 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 RBKSQ9H477 322 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 RPRMQ9NS64 109 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 MTCH1Q9NZJ7 389 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF581Q9P0T4 197 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 WIPI2Q9Y4P8 454 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 USF3Q68DE3 2245 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 DOCK11Q5JSL3 2073 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 DIDO1Q9BTC0 2240 aaKnown RBP4.02□□□□□ -1.77
LINC00458-202ENST00000427299 ZNF407Q9C0G0 2248 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 LAMA1P25391 3075 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 IGKV1-6A0A0C4DH72 117 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 MDFIC2A0A1B0GVS7 189 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 IQCF6A8MYZ5 107 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 SMIM1B2RUZ4 78 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 KLRC4-KLRK1H3BQV0 150 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 RAB29O14966 203 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 SYNGR1O43759 233 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 GGCTO75223 188 aaKnown RBP4.02□□□□□ -1.77
LINC00458-202ENST00000427299 TNFSF15O95150 251 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 OR2H2O95918 312 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 HAND1O96004 215 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 CXCL1P09341 107 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 DDTP30046 118 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 IL2RGP31785 369 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 PAX9P55771 341 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 ERVK-16P61578 105 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 HERV-K104P63124 156 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 PAX5Q02548 391 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 OR1C1Q15619 314 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 TMEM249Q2WGJ8 235 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 KIAA1644Q3SXP7 199 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 ACTL10Q5JWF8 245 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 SPANXN5Q5MJ07 72 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 FFAR4Q5NUL3 377 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 WDR25Q64LD2 544 aaPredicted RBP4.02□□□□□ -1.77
LINC00458-202ENST00000427299 ZNF343Q6P1L6 599 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 H2BFWTQ7Z2G1 175 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 DRAM1Q8N682 238 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 TMEM178AQ8NBL3 297 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 OR1K1Q8NGR3 316 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 DTD1Q8TEA8 209 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 RDH5Q92781 318 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 TTTY12Q9BZ98 90 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 MRPL37Q9BZE1 423 aaKnown RBP4.02□□□□□ -1.77
LINC00458-202ENST00000427299 OR2D2Q9H210 308 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 PARLQ9H300 379 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 SLC25A22Q9H936 323 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 YAE1D1Q9NRH1 226 aa4.02□□□□□ -1.77
LINC00458-202ENST00000427299 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.02□□□□□ -1.77
LINC00458-202ENST00000427299 GTF3C1Q12789 2109 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 RANBP2P49792 3224 aaKnown RBP4.01□□□□□ -1.77
LINC00458-202ENST00000427299 TET2Q6N021 2002 aaPredicted RBP4.01□□□□□ -1.77
LINC00458-202ENST00000427299 TRBV9A0A0B4J1U6 114 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 TRGV8A0A0C4DH27 118 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 A0A0G2JRQ6 117 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 A0A1W2PPV4 95 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 ODAMA1E959 279 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 XKRY2A2RUG3 117 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 LRRC30A6NM36 301 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 C11orf94C9JXX5 98 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 SIRPB1O00241 398 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 RBFOX2O43251 390 aaKnown RBP eCLIP4.01□□□□□ -1.77
LINC00458-202ENST00000427299 CIDEAO60543 219 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 TMEM50AO95807 157 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 NGFP01138 241 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 IGKV1-5P01602 117 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 IGHV3-9P01782 118 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 SFTPCP11686 197 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 CCL4P13236 92 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 PRDX2P32119 198 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 FGF8P55075 233 aaPredicted RBP4.01□□□□□ -1.77
LINC00458-202ENST00000427299 RANP62826 216 aaKnown RBP4.01□□□□□ -1.77
LINC00458-202ENST00000427299 RPL23P62829 140 aaKnown RBP4.01□□□□□ -1.77
LINC00458-202ENST00000427299 CCL20P78556 96 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 JOSD1Q15040 202 aaPredicted RBP4.01□□□□□ -1.77
LINC00458-202ENST00000427299 ZNF726P1Q15940 193 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 RTL8BQ17RB0 113 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 COX19Q49B96 90 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 FBXW9Q5XUX1 488 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 OR8G2PQ6IF36 304 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 Q6P435 159 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 SPNS3Q6ZMD2 512 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 COX8CQ7Z4L0 72 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 C17orf78Q8N4C9 275 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 OR10G9Q8NGN4 311 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 OR10G7Q8NGN6 311 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 OR4F5Q8NH21 305 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 FRZBQ92765 325 aa4.01□□□□□ -1.77
LINC00458-202ENST00000427299 RPUSD4Q96CM3 377 aaKnown RBP4.01□□□□□ -1.77
LINC00458-202ENST00000427299 MRPL53Q96EL3 112 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms