RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 ATP6V0CP27449 155 aa14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 IRF3Q14653 427 aa14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 C1QL2Q7Z5L3 287 aa14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 GBF1Q92538 1859 aa14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 IFI27L2Q9H2X8 130 aa14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 PLA2G2AP14555 144 aa14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 HGFACQ04756 655 aa14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 IBA57Q5T440 356 aaKnown RBP14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 ZNF660Q6AZW8 331 aaPredicted RBP14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 USMG5Q96IX5 58 aa14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 KIR2DL4Q99706 377 aa14.02□□□□□ -0.17
SYNGAP1-202ENST00000418600 A0A1B0GUS0 222 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 MLNRO43193 412 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 ZNF415Q09FC8 603 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 MEIG1Q5JSS6 88 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 PAX1P15863 534 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 EGR1P18146 543 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 CFHR2P36980 270 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 NMUP48645 174 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 TCF24Q7RTU0 167 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 NEU1Q99519 415 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 GEMIN7Q9H840 131 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 EREGO14944 169 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 PRTN3P24158 256 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 JOSD1Q15040 202 aaPredicted RBP14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 MIC13Q5XKP0 118 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 LINC00305Q7Z4B0 112 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 TRGV4A0A0C4DH28 118 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 FAM223BA6NKX1 122 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 H3BTX0 84 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 IL6RP08887 468 aaPredicted RBP14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 HEPN1Q6WQI6 88 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 FAM223AQ8IWN6 122 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 BEND2Q8NDZ0 799 aa14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 MRPL32Q9BYC8 188 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-202ENST00000418600 ZNF600Q6ZNG1 722 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 TM2D1Q9BX74 207 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 SDF2L1Q9HCN8 221 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 CXorf65A6NEN9 183 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 TMEM14DPA8MWL7 114 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 PRSS2P07478 247 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 TMEM249Q2WGJ8 235 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 FAM120AOSQ5T036 256 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 CACNA1IQ9P0X4 2223 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 C2orf83Q53S99 150 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 ZNF880Q6PDB4 577 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 HLA-DQA1P01909 254 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 SELLP14151 372 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 PSMG4Q5JS54 123 aa14□□□□□ -0.17
SYNGAP1-202ENST00000418600 C7orf77A4D0Y5 90 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 C17orf98A8MV24 154 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 PRO1933Q9H354 126 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 SCN2AQ99250 2005 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 CD177Q8N6Q3 437 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 RNASEH2CQ8TDP1 164 aaKnown RBP13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 DAZAP2Q15038 168 aaPredicted RBP13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 PCM1Q15154 2024 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 DOCK4Q8N1I0 1966 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 UPK2O00526 184 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 ASIPP42127 132 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 FOXB2Q5VYV0 432 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 TNFRSF18Q9Y5U5 241 aa13.99□□□□□ -0.17
SYNGAP1-202ENST00000418600 COTL1Q14019 142 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 ASCL4Q6XD76 172 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 RNF5Q99942 180 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 CACNA1GO43497 2377 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 C8orf88P0DMB2 117 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 SAPCD1Q5SSQ6 148 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 C1QTNF4Q9BXJ3 329 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 DIRC3C9JPN6 131 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 ASXL3Q9C0F0 2248 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 HLA-DRB1P01911 266 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 CDX1P47902 265 aaPredicted RBP13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 SGMS2Q8NHU3 365 aa13.98□□□□□ -0.17
SYNGAP1-202ENST00000418600 GHRHP01286 108 aa13.97□□□□□ -0.17
SYNGAP1-202ENST00000418600 GLMPQ8WWB7 406 aa13.97□□□□□ -0.17
SYNGAP1-202ENST00000418600 TRBV7-1A0A0A6YYK4 115 aa13.97□□□□□ -0.17
SYNGAP1-202ENST00000418600 SOD3P08294 240 aa13.97□□□□□ -0.17
SYNGAP1-202ENST00000418600 APOC4P55056 127 aa13.97□□□□□ -0.17
SYNGAP1-202ENST00000418600 OR9G4Q8NGQ1 327 aa13.97□□□□□ -0.17
SYNGAP1-202ENST00000418600 PEF1Q9UBV8 284 aaKnown RBP13.97□□□□□ -0.17
SYNGAP1-202ENST00000418600 UCP3P55916 312 aa13.96□□□□□ -0.17
SYNGAP1-202ENST00000418600 C15orf32Q32M92 178 aa13.96□□□□□ -0.17
SYNGAP1-202ENST00000418600 SELENOKQ9Y6D0 94 aa13.96□□□□□ -0.17
SYNGAP1-202ENST00000418600 SIGLEC15Q6ZMC9 328 aa13.96□□□□□ -0.17
SYNGAP1-202ENST00000418600 PRELID3AQ96N28 172 aa13.96□□□□□ -0.17
SYNGAP1-202ENST00000418600 SVILO95425 2214 aa13.96□□□□□ -0.17
SYNGAP1-202ENST00000418600 PMCHL1Q16048 86 aa13.96□□□□□ -0.17
SYNGAP1-202ENST00000418600 OR5AN1Q8NGI8 311 aa13.96□□□□□ -0.17
SYNGAP1-202ENST00000418600 V9GYH0 126 aa13.96□□□□□ -0.17
SYNGAP1-202ENST00000418600 RPLP1P05386 114 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-202ENST00000418600 PVRIGQ6DKI7 326 aa13.96□□□□□ -0.18
SYNGAP1-202ENST00000418600 RNASE1P07998 156 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-202ENST00000418600 IGHV4-30-2A0A087WSY4 118 aa13.95□□□□□ -0.18
SYNGAP1-202ENST00000418600 TRAV24A0A0B4J272 114 aa13.95□□□□□ -0.18
SYNGAP1-202ENST00000418600 TSSC4Q9Y5U2 329 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-202ENST00000418600 ASCC3Q8N3C0 2202 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-202ENST00000418600 OVOL1O14753 267 aa13.95□□□□□ -0.18
SYNGAP1-202ENST00000418600 TMEM183AQ8IXX5 376 aa13.95□□□□□ -0.18
SYNGAP1-202ENST00000418600 DNAL4O96015 105 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 838.6 ms