RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TXN2Q99757 166 aa11.25□□□□□ -0.61
CHD1-202ENST00000414220 HEYLQ9NQ87 328 aaPredicted RBP11.25□□□□□ -0.61
CHD1-202ENST00000414220 A0A0G2JRQ6 117 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 NDUFB6O95139 128 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 SFT2D2O95562 160 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 HTR2BP41595 481 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 SUPT4H1P63272 117 aaKnown RBP11.24□□□□□ -0.61
CHD1-202ENST00000414220 SMCO1Q147U7 214 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 SPINK9Q5DT21 86 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 DUSP18Q8NEJ0 188 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 OR2K2Q8NGT1 345 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 PINX1Q96BK5 328 aaKnown RBP11.24□□□□□ -0.61
CHD1-202ENST00000414220 PTTG2Q9NZH5 202 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 TMED3Q9Y3Q3 217 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 DMRT1Q9Y5R6 373 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 MEGF8Q7Z7M0 2845 aa11.24□□□□□ -0.61
CHD1-202ENST00000414220 A0A1B0GU03 582 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 WI2-2373I1.2A0A1W2PRP0 233 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 K7EIL1 84 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 NUPL2O15504 423 aaKnown RBP11.23□□□□□ -0.61
CHD1-202ENST00000414220 IGLV1-51P01701 117 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 HLA-AP01891 365 aaKnown RBP11.23□□□□□ -0.61
CHD1-202ENST00000414220 CSN3P07498 182 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 NPBWR1P48145 328 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 RELQ04864 619 aaPredicted RBP11.23□□□□□ -0.61
CHD1-202ENST00000414220 AARDQ4LEZ3 155 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 LCN12Q6JVE5 192 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 Q6ZRM9 215 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 LYZL2Q7Z4W2 148 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 OR1S1Q8NH92 325 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 COQ8AQ8NI60 647 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 PRR25Q96S07 402 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 SDHCQ99643 169 aaPredicted RBP11.23□□□□□ -0.61
CHD1-202ENST00000414220 WDR12Q9GZL7 423 aaKnown RBP11.23□□□□□ -0.61
CHD1-202ENST00000414220 UFC1Q9Y3C8 167 aa11.23□□□□□ -0.61
CHD1-202ENST00000414220 IGHV3-21A0A0B4J1V1 117 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 RPS10-NUDT3A0A1W2PQS6 291 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 OR2T8A6NH00 312 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 K7EIM0 57 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 MT-CO2P00403 227 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 GP9P14770 177 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 MFAP2P55001 183 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 ELLP55199 621 aaPredicted RBP11.22□□□□□ -0.61
CHD1-202ENST00000414220 PPP1R1AQ13522 171 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 LRTM2Q8N967 370 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 MARC2Q969Z3 335 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 ZC4H2Q9NQZ6 224 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 TECRQ9NZ01 308 aaKnown RBP11.22□□□□□ -0.61
CHD1-202ENST00000414220 PRR13Q9NZ81 148 aa11.22□□□□□ -0.61
CHD1-202ENST00000414220 I3L2K1 104 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 NDUFA4O00483 81 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 LYRM1O43325 122 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 GNG7O60262 68 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 IFNA21P01568 189 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 SPNP16150 400 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 FCGR2BP31994 310 aaPredicted RBP11.21□□□□□ -0.61
CHD1-202ENST00000414220 ATP5IP56385 69 aaPredicted RBP11.21□□□□□ -0.61
CHD1-202ENST00000414220 ZNF846Q147U1 533 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 C4orf46Q504U0 113 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 NMSQ5H8A3 153 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 MZT2BQ6NZ67 158 aa11.21□□□□□ -0.61
CHD1-202ENST00000414220 C2orf70A6NJV1 201 aa11.2□□□□□ -0.62
CHD1-202ENST00000414220 MED6O75586 246 aa11.2□□□□□ -0.62
CHD1-202ENST00000414220 RNASE2P10153 161 aaKnown RBP11.2□□□□□ -0.62
CHD1-202ENST00000414220 SLC25A6P12236 298 aa11.2□□□□□ -0.62
CHD1-202ENST00000414220 FOLR2P14207 255 aa11.2□□□□□ -0.62
CHD1-202ENST00000414220 OPRK1P41145 380 aa11.2□□□□□ -0.62
CHD1-202ENST00000414220 TNFRSF9Q07011 255 aa11.2□□□□□ -0.62
CHD1-202ENST00000414220 IL34Q6ZMJ4 242 aa11.2□□□□□ -0.62
CHD1-202ENST00000414220 SLC24A4Q8NFF2 622 aa11.2□□□□□ -0.62
CHD1-202ENST00000414220 MRPL27Q9P0M9 148 aaKnown RBP11.2□□□□□ -0.62
CHD1-202ENST00000414220 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
CHD1-202ENST00000414220 U3KQ87 197 aa11.2□□□□□ -0.62
CHD1-202ENST00000414220 C9orf170A2RU37 121 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 A8MWP6 167 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 FAM90A26D6RGX4 464 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 IFNA10P01566 189 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 HOXB5P09067 269 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 OR4E1P0C645 316 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 CBLN1P23435 193 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 RPP30P78346 268 aaKnown RBP11.19□□□□□ -0.62
CHD1-202ENST00000414220 CD69Q07108 199 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 C2orf83Q53S99 150 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 GTSCR1Q86UQ5 136 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 RNASEH2CQ8TDP1 164 aaKnown RBP11.19□□□□□ -0.62
CHD1-202ENST00000414220 DTD1Q8TEA8 209 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 ZNF436Q9C0F3 470 aaPredicted RBP11.19□□□□□ -0.62
CHD1-202ENST00000414220 HSPB7Q9UBY9 170 aa11.19□□□□□ -0.62
CHD1-202ENST00000414220 TRAV30A0A087WSZ9 112 aa11.18□□□□□ -0.62
CHD1-202ENST00000414220 FAM240BA0A1B0GVZ2 78 aa11.18□□□□□ -0.62
CHD1-202ENST00000414220 YIF1AO95070 293 aa11.18□□□□□ -0.62
CHD1-202ENST00000414220 NXPH3O95157 252 aa11.18□□□□□ -0.62
CHD1-202ENST00000414220 ANKRD55Q3KP44 614 aa11.18□□□□□ -0.62
CHD1-202ENST00000414220 LYG2Q86SG7 212 aa11.18□□□□□ -0.62
CHD1-202ENST00000414220 CIB3Q96Q77 187 aaPredicted RBP11.18□□□□□ -0.62
CHD1-202ENST00000414220 C20orf24Q9BUV8 137 aa11.18□□□□□ -0.62
CHD1-202ENST00000414220 DAZ1Q9NQZ3 744 aaKnown RBP11.18□□□□□ -0.62
CHD1-202ENST00000414220 FLVCR2Q9UPI3 526 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms