RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ZNF436Q9C0F3 470 aaPredicted RBP14.25□□□□□ -0.13
TRIM56-202ENST00000412507 KCNIP3Q9Y2W7 256 aa14.25□□□□□ -0.13
TRIM56-202ENST00000412507 TMEM56-RWDD3S4R434 201 aa14.25□□□□□ -0.13
TRIM56-202ENST00000412507 I3L2K1 104 aa14.24□□□□□ -0.13
TRIM56-202ENST00000412507 FRMD6-AS1P0C7T7 363 aa14.24□□□□□ -0.13
TRIM56-202ENST00000412507 NHLRC4P0CG21 123 aaPredicted RBP14.24□□□□□ -0.13
TRIM56-202ENST00000412507 SNCAP37840 140 aa14.24□□□□□ -0.13
TRIM56-202ENST00000412507 HOXA1P49639 335 aaPredicted RBP14.24□□□□□ -0.13
TRIM56-202ENST00000412507 PINX1Q96BK5 328 aaKnown RBP14.24□□□□□ -0.13
TRIM56-202ENST00000412507 GPR146Q96CH1 333 aa14.24□□□□□ -0.13
TRIM56-202ENST00000412507 GALNT14Q96FL9 552 aa14.24□□□□□ -0.13
TRIM56-202ENST00000412507 ATP6V0BQ99437 205 aa14.24□□□□□ -0.13
TRIM56-202ENST00000412507 SRRQ9GZT4 340 aa14.24□□□□□ -0.13
TRIM56-202ENST00000412507 PALMDQ9NP74 551 aa14.24□□□□□ -0.13
TRIM56-202ENST00000412507 TECRQ9NZ01 308 aaKnown RBP14.24□□□□□ -0.13
TRIM56-202ENST00000412507 CACNG5Q9UF02 275 aa14.24□□□□□ -0.13
TRIM56-202ENST00000412507 INS-IGF2F8WCM5 200 aa14.23□□□□□ -0.13
TRIM56-202ENST00000412507 MT-CO2P00403 227 aa14.23□□□□□ -0.13
TRIM56-202ENST00000412507 IGHV3-48P01763 117 aa14.23□□□□□ -0.13
TRIM56-202ENST00000412507 ADMP35318 185 aa14.23□□□□□ -0.13
TRIM56-202ENST00000412507 SUPT4H1P63272 117 aaKnown RBP14.23□□□□□ -0.13
TRIM56-202ENST00000412507 ZNF57Q68EA5 555 aaPredicted RBP14.23□□□□□ -0.13
TRIM56-202ENST00000412507 SPSB3Q6PJ21 355 aa14.23□□□□□ -0.13
TRIM56-202ENST00000412507 SBSPONQ8IVN8 264 aa14.23□□□□□ -0.13
TRIM56-202ENST00000412507 UXS1Q8NBZ7 420 aa14.23□□□□□ -0.13
TRIM56-202ENST00000412507 S100ZQ8WXG8 99 aa14.23□□□□□ -0.13
TRIM56-202ENST00000412507 ENY2Q9NPA8 101 aa14.23□□□□□ -0.13
TRIM56-202ENST00000412507 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.23□□□□□ -0.13
TRIM56-202ENST00000412507 ZNF785A8K8V0 405 aa14.22□□□□□ -0.13
TRIM56-202ENST00000412507 IGHV4-30-4P0DP06 118 aa14.22□□□□□ -0.13
TRIM56-202ENST00000412507 MFAP4P55083 255 aa14.22□□□□□ -0.13
TRIM56-202ENST00000412507 TMED4Q7Z7H5 227 aa14.22□□□□□ -0.13
TRIM56-202ENST00000412507 GTSCR1Q86UQ5 136 aa14.22□□□□□ -0.13
TRIM56-202ENST00000412507 TMEM190Q8WZ59 177 aa14.22□□□□□ -0.13
TRIM56-202ENST00000412507 IL22RA2Q969J5 263 aa14.22□□□□□ -0.13
TRIM56-202ENST00000412507 MLXQ9UH92 298 aa14.22□□□□□ -0.13
TRIM56-202ENST00000412507 UFC1Q9Y3C8 167 aa14.22□□□□□ -0.13
TRIM56-202ENST00000412507 CTSGP08311 255 aa14.21□□□□□ -0.13
TRIM56-202ENST00000412507 RNASE2P10153 161 aaKnown RBP14.21□□□□□ -0.13
TRIM56-202ENST00000412507 ELLP55199 621 aaPredicted RBP14.21□□□□□ -0.13
TRIM56-202ENST00000412507 SPCS3P61009 180 aa14.21□□□□□ -0.13
TRIM56-202ENST00000412507 GUCA2BQ16661 112 aa14.21□□□□□ -0.13
TRIM56-202ENST00000412507 AARDQ4LEZ3 155 aa14.21□□□□□ -0.13
TRIM56-202ENST00000412507 DEDD2Q8WXF8 326 aa14.21□□□□□ -0.13
TRIM56-202ENST00000412507 WDR89Q96FK6 387 aaPredicted RBP14.21□□□□□ -0.13
TRIM56-202ENST00000412507 TENM3Q9P273 2699 aa14.21□□□□□ -0.13
TRIM56-202ENST00000412507 IGHV3OR16-8A0A075B7F1 116 aa14.2□□□□□ -0.14
TRIM56-202ENST00000412507 NDUFA4O00483 81 aa14.2□□□□□ -0.14
TRIM56-202ENST00000412507 C8orf88P0DMB2 117 aa14.2□□□□□ -0.14
TRIM56-202ENST00000412507 FCGR2BP31994 310 aaPredicted RBP14.2□□□□□ -0.14
TRIM56-202ENST00000412507 SUB1P53999 127 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRIM56-202ENST00000412507 BAK1Q16611 211 aa14.2□□□□□ -0.14
TRIM56-202ENST00000412507 BTNL8Q6UX41 500 aa14.2□□□□□ -0.14
TRIM56-202ENST00000412507 OR52E5Q8NH55 327 aa14.2□□□□□ -0.14
TRIM56-202ENST00000412507 MARC2Q969Z3 335 aa14.2□□□□□ -0.14
TRIM56-202ENST00000412507 TXN2Q99757 166 aa14.2□□□□□ -0.14
TRIM56-202ENST00000412507 GAR1Q9NY12 217 aaKnown RBP14.2□□□□□ -0.14
TRIM56-202ENST00000412507 MRPL27Q9P0M9 148 aaKnown RBP14.2□□□□□ -0.14
TRIM56-202ENST00000412507 U3KQK5 164 aa14.2□□□□□ -0.14
TRIM56-202ENST00000412507 HUWE1Q7Z6Z7 4374 aaKnown RBP14.19□□□□□ -0.14
TRIM56-202ENST00000412507 STAB2Q8WWQ8 2551 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 NUPL2O15504 423 aaKnown RBP14.19□□□□□ -0.14
TRIM56-202ENST00000412507 NXPH3O95157 252 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 ANXA3P12429 323 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 INPP1P49441 399 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 CD81P60033 236 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 PVRIGQ6DKI7 326 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 LYZL2Q7Z4W2 148 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 TMEM61Q8N0U2 210 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 ZNF414Q96IQ9 312 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 SDHCQ99643 169 aaPredicted RBP14.19□□□□□ -0.14
TRIM56-202ENST00000412507 SLC25A21Q9BQT8 299 aaPredicted RBP14.19□□□□□ -0.14
TRIM56-202ENST00000412507 C20orf24Q9BUV8 137 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 WDR12Q9GZL7 423 aaKnown RBP14.19□□□□□ -0.14
TRIM56-202ENST00000412507 C19orf73Q9NVV2 129 aa14.19□□□□□ -0.14
TRIM56-202ENST00000412507 A0A0B4J2A0 478 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 A8MZ25 164 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 ZNF207O43670 478 aaKnown RBP14.18□□□□□ -0.14
TRIM56-202ENST00000412507 GNG7O60262 68 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 CD7P09564 240 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 SULT1A3P0DMM9 295 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 SULT1A4P0DMN0 295 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 TMEM128Q5BJH2 165 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 TRIQKQ629K1 86 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 LGI3Q8N145 548 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 NEURL2Q9BR09 285 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 HEYLQ9NQ87 328 aaPredicted RBP14.18□□□□□ -0.14
TRIM56-202ENST00000412507 DAZ1Q9NQZ3 744 aaKnown RBP14.18□□□□□ -0.14
TRIM56-202ENST00000412507 SHPKQ9UHJ6 478 aa14.18□□□□□ -0.14
TRIM56-202ENST00000412507 CEBPZOSA8MTT3 80 aa14.17□□□□□ -0.14
TRIM56-202ENST00000412507 CORTO00230 105 aa14.17□□□□□ -0.14
TRIM56-202ENST00000412507 SCAF4O95104 1147 aaKnown RBP14.17□□□□□ -0.14
TRIM56-202ENST00000412507 CCR6P51684 374 aa14.17□□□□□ -0.14
TRIM56-202ENST00000412507 SRPXP78539 464 aa14.17□□□□□ -0.14
TRIM56-202ENST00000412507 ZNF846Q147U1 533 aa14.17□□□□□ -0.14
TRIM56-202ENST00000412507 BSXQ3C1V8 233 aa14.17□□□□□ -0.14
TRIM56-202ENST00000412507 NMSQ5H8A3 153 aa14.17□□□□□ -0.14
TRIM56-202ENST00000412507 DUSP18Q8NEJ0 188 aa14.17□□□□□ -0.14
TRIM56-202ENST00000412507 LINC00854A0A1B0GVQ3 168 aa14.16□□□□□ -0.14
TRIM56-202ENST00000412507 VAMP1P23763 118 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms