RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SCARB1Q8WTV0 552 aa17.11■□□□□ 0.33
PTCD3-203ENST00000409783 GPR61Q9BZJ8 451 aa17.11■□□□□ 0.33
PTCD3-203ENST00000409783 IGHV3-21A0A0B4J1V1 117 aa17.1■□□□□ 0.33
PTCD3-203ENST00000409783 F8W735 103 aaPredicted RBP17.1■□□□□ 0.33
PTCD3-203ENST00000409783 NXPH3O95157 252 aa17.1■□□□□ 0.33
PTCD3-203ENST00000409783 HOXB5P09067 269 aa17.1■□□□□ 0.33
PTCD3-203ENST00000409783 DEFA6Q01524 100 aa17.1■□□□□ 0.33
PTCD3-203ENST00000409783 TNFRSF9Q07011 255 aa17.1■□□□□ 0.33
PTCD3-203ENST00000409783 RPEL1Q2QD12 228 aa17.1■□□□□ 0.33
PTCD3-203ENST00000409783 C9orf66Q5T8R8 295 aa17.1■□□□□ 0.33
PTCD3-203ENST00000409783 GGNBP1Q5YKI7 109 aa17.1■□□□□ 0.33
PTCD3-203ENST00000409783 OR52B4Q8NGK2 314 aa17.1■□□□□ 0.33
PTCD3-203ENST00000409783 CACFD1Q9UGQ2 172 aa17.1■□□□□ 0.33
PTCD3-203ENST00000409783 GGCTO75223 188 aaKnown RBP17.09■□□□□ 0.33
PTCD3-203ENST00000409783 ADAP1O75689 374 aa17.09■□□□□ 0.33
PTCD3-203ENST00000409783 CLEC3BP05452 202 aa17.09■□□□□ 0.33
PTCD3-203ENST00000409783 H2AFB2P0C5Z0 115 aa17.09■□□□□ 0.33
PTCD3-203ENST00000409783 SNCAP37840 140 aa17.09■□□□□ 0.33
PTCD3-203ENST00000409783 SYNJ2BPP57105 145 aa17.09■□□□□ 0.33
PTCD3-203ENST00000409783 KRTAP10-11P60412 298 aa17.09■□□□□ 0.33
PTCD3-203ENST00000409783 IL34Q6ZMJ4 242 aa17.09■□□□□ 0.33
PTCD3-203ENST00000409783 MITD1Q8WV92 249 aa17.09■□□□□ 0.33
PTCD3-203ENST00000409783 ENY2Q9NPA8 101 aa17.09■□□□□ 0.33
PTCD3-203ENST00000409783 OR2C1O95371 312 aa17.08■□□□□ 0.32
PTCD3-203ENST00000409783 GPR183P32249 361 aa17.08■□□□□ 0.32
PTCD3-203ENST00000409783 ARL3P36405 182 aa17.08■□□□□ 0.32
PTCD3-203ENST00000409783 OR1S1Q8NH92 325 aa17.08■□□□□ 0.32
PTCD3-203ENST00000409783 COQ8AQ8NI60 647 aa17.08■□□□□ 0.32
PTCD3-203ENST00000409783 TMEM170AQ8WVE7 144 aa17.08■□□□□ 0.32
PTCD3-203ENST00000409783 MISP3Q96FF7 219 aa17.08■□□□□ 0.32
PTCD3-203ENST00000409783 ATP6V0BQ99437 205 aa17.08■□□□□ 0.32
PTCD3-203ENST00000409783 C21orf62Q9NYP8 219 aa17.08■□□□□ 0.32
PTCD3-203ENST00000409783 CEBPZOSA8MTT3 80 aa17.07■□□□□ 0.32
PTCD3-203ENST00000409783 MT-CO2P00403 227 aa17.07■□□□□ 0.32
PTCD3-203ENST00000409783 DUSP18Q8NEJ0 188 aa17.07■□□□□ 0.32
PTCD3-203ENST00000409783 OR9G4Q8NGQ1 327 aa17.07■□□□□ 0.32
PTCD3-203ENST00000409783 RBKSQ9H477 322 aa17.07■□□□□ 0.32
PTCD3-203ENST00000409783 HEYLQ9NQ87 328 aaPredicted RBP17.07■□□□□ 0.32
PTCD3-203ENST00000409783 MPTX1A8MV57 137 aa17.06■□□□□ 0.32
PTCD3-203ENST00000409783 PRB2P02812 416 aaPredicted RBP17.06■□□□□ 0.32
PTCD3-203ENST00000409783 HTR2BP41595 481 aa17.06■□□□□ 0.32
PTCD3-203ENST00000409783 INSL3P51460 131 aa17.06■□□□□ 0.32
PTCD3-203ENST00000409783 NRARPQ7Z6K4 114 aa17.06■□□□□ 0.32
PTCD3-203ENST00000409783 GPHB5Q86YW7 130 aa17.06■□□□□ 0.32
PTCD3-203ENST00000409783 SEC22CQ9BRL7 303 aa17.06■□□□□ 0.32
PTCD3-203ENST00000409783 TGOLN2O43493 480 aa17.05■□□□□ 0.32
PTCD3-203ENST00000409783 FCGR2BP31994 310 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-203ENST00000409783 SUB1P53999 127 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTCD3-203ENST00000409783 C2orf83Q53S99 150 aa17.05■□□□□ 0.32
PTCD3-203ENST00000409783 ENKURQ8TC29 256 aa17.05■□□□□ 0.32
PTCD3-203ENST00000409783 ZNF414Q96IQ9 312 aa17.05■□□□□ 0.32
PTCD3-203ENST00000409783 FNDC4Q9H6D8 234 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-203ENST00000409783 ZC4H2Q9NQZ6 224 aa17.05■□□□□ 0.32
PTCD3-203ENST00000409783 OR2T8A6NH00 312 aa17.04■□□□□ 0.32
PTCD3-203ENST00000409783 FAM90A26D6RGX4 464 aa17.04■□□□□ 0.32
PTCD3-203ENST00000409783 SAP30O75446 220 aa17.04■□□□□ 0.32
PTCD3-203ENST00000409783 IGHV3-48P01763 117 aa17.04■□□□□ 0.32
PTCD3-203ENST00000409783 CSN3P07498 182 aa17.04■□□□□ 0.32
PTCD3-203ENST00000409783 ADMP35318 185 aa17.04■□□□□ 0.32
PTCD3-203ENST00000409783 TATDN3Q17R31 274 aa17.04■□□□□ 0.32
PTCD3-203ENST00000409783 SLC24A4Q8NFF2 622 aa17.04■□□□□ 0.32
PTCD3-203ENST00000409783 DTD1Q8TEA8 209 aa17.04■□□□□ 0.32
PTCD3-203ENST00000409783 ZNF431Q8TF32 576 aaPredicted RBP17.04■□□□□ 0.32
PTCD3-203ENST00000409783 PINX1Q96BK5 328 aaKnown RBP17.04■□□□□ 0.32
PTCD3-203ENST00000409783 BSCL2Q96G97 398 aaPredicted RBP17.04■□□□□ 0.32
PTCD3-203ENST00000409783 CHRDL1Q9BU40 450 aa17.04■□□□□ 0.32
PTCD3-203ENST00000409783 LGALS9O00182 355 aa17.03■□□□□ 0.32
PTCD3-203ENST00000409783 PLET1Q6UQ28 207 aa17.03■□□□□ 0.32
PTCD3-203ENST00000409783 ADAMTSL5Q6ZMM2 481 aa17.03■□□□□ 0.32
PTCD3-203ENST00000409783 REC114Q7Z4M0 266 aa17.03■□□□□ 0.32
PTCD3-203ENST00000409783 TXN2Q99757 166 aa17.03■□□□□ 0.32
PTCD3-203ENST00000409783 ELOVL1Q9BW60 279 aa17.03■□□□□ 0.32
PTCD3-203ENST00000409783 HIPK2Q9H2X6 1198 aa17.03■□□□□ 0.32
PTCD3-203ENST00000409783 AURKAIP1Q9NWT8 199 aaPredicted RBP17.03■□□□□ 0.32
PTCD3-203ENST00000409783 CORTO00230 105 aa17.02■□□□□ 0.32
PTCD3-203ENST00000409783 IL5P05113 134 aa17.02■□□□□ 0.32
PTCD3-203ENST00000409783 CTSGP08311 255 aa17.02■□□□□ 0.32
PTCD3-203ENST00000409783 MFAP4P55083 255 aa17.02■□□□□ 0.32
PTCD3-203ENST00000409783 MLANAQ16655 118 aa17.02■□□□□ 0.32
PTCD3-203ENST00000409783 SPSB3Q6PJ21 355 aa17.02■□□□□ 0.32
PTCD3-203ENST00000409783 OR10C1Q96KK4 312 aa17.02■□□□□ 0.32
PTCD3-203ENST00000409783 OR4C12Q96R67 309 aa17.02■□□□□ 0.32
PTCD3-203ENST00000409783 ZNF436Q9C0F3 470 aaPredicted RBP17.02■□□□□ 0.32
PTCD3-203ENST00000409783 SIGLEC8Q9NYZ4 499 aa17.02■□□□□ 0.32
PTCD3-203ENST00000409783 MRPL36Q9P0J6 103 aaKnown RBP17.02■□□□□ 0.32
PTCD3-203ENST00000409783 IFNA21P01568 189 aa17.01■□□□□ 0.31
PTCD3-203ENST00000409783 NPY1RP25929 384 aa17.01■□□□□ 0.31
PTCD3-203ENST00000409783 DEFA1P59665 94 aa17.01■□□□□ 0.31
PTCD3-203ENST00000409783 DEFA3P59666 94 aa17.01■□□□□ 0.31
PTCD3-203ENST00000409783 Q56UQ5 140 aa17.01■□□□□ 0.31
PTCD3-203ENST00000409783 UBAC2Q8NBM4 344 aa17.01■□□□□ 0.31
PTCD3-203ENST00000409783 OR4D5Q8NGN0 318 aa17.01■□□□□ 0.31
PTCD3-203ENST00000409783 U3KQ87 197 aa17.01■□□□□ 0.31
PTCD3-203ENST00000409783 SORL1Q92673 2214 aa17■□□□□ 0.31
PTCD3-203ENST00000409783 IGHV3-35A0A0C4DH35 117 aa17■□□□□ 0.31
PTCD3-203ENST00000409783 A8MWP6 167 aa17■□□□□ 0.31
PTCD3-203ENST00000409783 IGLV1-51P01701 117 aa17■□□□□ 0.31
PTCD3-203ENST00000409783 EDN2P20800 178 aa17■□□□□ 0.31
PTCD3-203ENST00000409783 ID3Q02535 119 aa17■□□□□ 0.31
PTCD3-203ENST00000409783 FAM106AQ4KMX7 169 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms