RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TRAV14DV4A0A0A6YYC5 116 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 PSCAO43653 123 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 SELLP14151 372 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 C2orf68Q2NKX9 166 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 FAM209BQ5JX69 171 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 UQCR10Q9UDW1 63 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 EIF4EBP2Q13542 120 aaPredicted RBP11.51□□□□□ -0.57
VAPA-202ENST00000400000 ZNF329Q86UD4 541 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 SAXO1Q8IYX7 474 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 NXT2Q9NPJ8 142 aaKnown RBP11.51□□□□□ -0.57
VAPA-202ENST00000400000 TRIOBPQ9H2D6 2365 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 KIF13BQ9NQT8 1826 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 TDGF1P3P51864 188 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 OR5A1Q8NGJ0 315 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 TNS1Q9HBL0 1735 aaKnown RBP11.51□□□□□ -0.57
VAPA-202ENST00000400000 SCN4AP35499 1836 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 RTN4RL2Q86UN3 420 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 PRSS22Q9GZN4 317 aa11.51□□□□□ -0.57
VAPA-202ENST00000400000 MT-ND6P03923 174 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 ZNF708P17019 499 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 MARF1Q9Y4F3 1742 aaKnown RBP11.5□□□□□ -0.57
VAPA-202ENST00000400000 TIMM23O14925 209 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 CFHR5Q9BXR6 569 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 IGKV2-40A0A087WW87 121 aaPredicted RBP11.5□□□□□ -0.57
VAPA-202ENST00000400000 IGKV2D-40P01614 121 aaPredicted RBP11.5□□□□□ -0.57
VAPA-202ENST00000400000 C1orf100Q5SVJ3 147 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 VMO1Q7Z5L0 202 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 FGFBP3Q8TAT2 258 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 CA1P00915 261 aaPredicted RBP11.5□□□□□ -0.57
VAPA-202ENST00000400000 C5orf24Q7Z6I8 188 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 POC1AQ8NBT0 407 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 TET1Q8NFU7 2136 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 PGPEP1LA6NFU8 196 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 NBR2O15453 112 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 FAM209AQ5JX71 171 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 SAPCD1Q5SSQ6 148 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 RIPPLY2Q5TAB7 128 aa11.5□□□□□ -0.57
VAPA-202ENST00000400000 IGHMP01871 453 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 C12orf54Q6X4T0 127 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 HIGD1CA8MV81 97 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 H7C1H1 209 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 RCC1LQ96I51 464 aaKnown RBP11.49□□□□□ -0.57
VAPA-202ENST00000400000 VKORC1Q9BQB6 163 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 IGHV1-18A0A0C4DH31 117 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 A0A1B0GV90 55 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 CTHRC1Q96CG8 243 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 FOXD3Q9UJU5 478 aaPredicted RBP11.49□□□□□ -0.57
VAPA-202ENST00000400000 DPRXA6NFQ7 191 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 DANCRP0C864 163 aa11.49□□□□□ -0.57
VAPA-202ENST00000400000 HOXB1P14653 301 aaPredicted RBP11.49□□□□□ -0.57
VAPA-202ENST00000400000 TCF20Q9UGU0 1960 aaKnown RBP11.48□□□□□ -0.57
VAPA-202ENST00000400000 PI4KAP42356 2102 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 TMEM14DPA8MWL7 114 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 H3BRM9 83 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 ATP5LO75964 103 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 CFHR3Q02985 330 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 TMEM183AQ8IXX5 376 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 VWCEQ96DN2 955 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
VAPA-202ENST00000400000 RBMY1BA6NDE4 496 aaKnown RBP11.48□□□□□ -0.57
VAPA-202ENST00000400000 RBMY1EA6NEQ0 496 aaKnown RBP11.48□□□□□ -0.57
VAPA-202ENST00000400000 RBMY1DP0C7P1 496 aaKnown RBP11.48□□□□□ -0.57
VAPA-202ENST00000400000 RBMY1A1P0DJD3 496 aaKnown RBP11.48□□□□□ -0.57
VAPA-202ENST00000400000 RBMY1CP0DJD4 496 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 POLEQ07864 2286 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 A0A1B0GWB2 263 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A10PA6NDY2 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A18PA6NE21 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A16PA6NEW6 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A20PA6NIJ5 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A8PA6NJQ4 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A7PA6NKC0 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A22PA8MWA6 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A12PA8MX19 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A5PA8MXJ8 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A23PA8MXZ1 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A15PP0C7V4 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A13PP0C7W8 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A14PP0C7W9 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A24PP0C7X0 464 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 VCX2Q9H322 139 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 ADARB2-AS1A8MUL3 147 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 COX5BP10606 129 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 FOXG1P55316 489 aaPredicted RBP11.48□□□□□ -0.57
VAPA-202ENST00000400000 UNQ6494/PRO21346Q6UXR6 183 aa11.48□□□□□ -0.57
VAPA-202ENST00000400000 YLPM1P49750 1951 aaKnown RBP11.48□□□□□ -0.57
VAPA-202ENST00000400000 CD28P10747 220 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 ZNF474Q6S9Z5 364 aaPredicted RBP11.47□□□□□ -0.57
VAPA-202ENST00000400000 C3orf56Q8N813 242 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 IMMP1LQ96LU5 166 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 AHCTF1Q8WYP5 2266 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 SCN5AQ14524 2016 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 VENTXO95231 258 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 LINC00158P58513 81 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 ACTL10Q5JWF8 245 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms