RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 RAB1CQ92928 201 aa19.33■□□□□ 0.69
PABPN1-202ENST00000397276 HARBI1Q96MB7 349 aa19.33■□□□□ 0.69
PABPN1-202ENST00000397276 TP53TG3Q9ULZ0 132 aa19.33■□□□□ 0.69
PABPN1-202ENST00000397276 NDUFB3O43676 98 aa19.33■□□□□ 0.68
PABPN1-202ENST00000397276 FRMD6-AS1P0C7T7 363 aa19.33■□□□□ 0.68
PABPN1-202ENST00000397276 STAG3L2P0CL84 134 aa19.33■□□□□ 0.68
PABPN1-202ENST00000397276 STAG3L3P0CL85 134 aa19.33■□□□□ 0.68
PABPN1-202ENST00000397276 GATA2P23769 480 aaPredicted RBP19.33■□□□□ 0.68
PABPN1-202ENST00000397276 OR10X1Q8NGY0 326 aa19.33■□□□□ 0.68
PABPN1-202ENST00000397276 CTSZQ9UBR2 303 aa19.33■□□□□ 0.68
PABPN1-202ENST00000397276 NPSP0C0P6 89 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 PRB3Q04118 309 aaPredicted RBP19.32■□□□□ 0.68
PABPN1-202ENST00000397276 EFNB3Q15768 340 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 TOMM20LQ6UXN7 152 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 Q6ZWC4 215 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 SPTA1P02549 2419 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 LCN2P80188 198 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 POU2AF1Q16633 256 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 PTPRQQ9UMZ3 2332 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 SHISA9B4DS77 424 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 K7ENP7 123 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 OR10J1P30954 320 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 DLX1P56177 255 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 LINC00310P59036 64 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 PRCDQ00LT1 54 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 ZNF833PQ6ZTB9 187 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 TMEM208Q9BTX3 173 aa19.32■□□□□ 0.68
PABPN1-202ENST00000397276 CBLN1P23435 193 aa19.31■□□□□ 0.68
PABPN1-202ENST00000397276 CDKN1AP38936 164 aa19.31■□□□□ 0.68
PABPN1-202ENST00000397276 MEF2CQ06413 473 aaPredicted RBP19.31■□□□□ 0.68
PABPN1-202ENST00000397276 LRRC10Q5BKY1 277 aa19.31■□□□□ 0.68
PABPN1-202ENST00000397276 VSTM5A8MXK1 200 aa19.31■□□□□ 0.68
PABPN1-202ENST00000397276 F2Z2F3 143 aa19.31■□□□□ 0.68
PABPN1-202ENST00000397276 CXorf1O96002 111 aa19.31■□□□□ 0.68
PABPN1-202ENST00000397276 PLAUP00749 431 aa19.31■□□□□ 0.68
PABPN1-202ENST00000397276 E7EUB6 86 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 PDE6DO43924 150 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 RAB31Q13636 194 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 OR4P4Q8NGL7 312 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 LRBAP50851 2863 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 LYNX1G3V0Z9 82 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 H0YJW9 148 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 APOA2P02652 100 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 LYNX1P0DP58 116 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 CMTM2Q8TAZ6 248 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 LINC01560Q8TB33 94 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 SFRP2Q96HF1 295 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 SSUH2Q9Y2M2 353 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 PAM16Q9Y3D7 125 aa19.3■□□□□ 0.68
PABPN1-202ENST00000397276 SCO2A0A1W2PP80 73 aa19.29■□□□□ 0.68
PABPN1-202ENST00000397276 BATFQ16520 125 aa19.29■□□□□ 0.68
PABPN1-202ENST00000397276 YTHDF2Q9Y5A9 579 aaKnown RBP19.29■□□□□ 0.68
PABPN1-202ENST00000397276 IGKV1OR2-108A0A075B7D4 117 aa19.29■□□□□ 0.68
PABPN1-202ENST00000397276 KCNIP2Q9NS61 270 aa19.29■□□□□ 0.68
PABPN1-202ENST00000397276 FLYWCH2Q96CP2 140 aaKnown RBP19.28■□□□□ 0.68
PABPN1-202ENST00000397276 ZNF257Q9Y2Q1 563 aa19.28■□□□□ 0.68
PABPN1-202ENST00000397276 SLC17A3O00476 420 aa19.28■□□□□ 0.68
PABPN1-202ENST00000397276 COMMD5Q9GZQ3 224 aa19.28■□□□□ 0.68
PABPN1-202ENST00000397276 RHOBP62745 196 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 RBPJQ06330 500 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 TMEM30BQ3MIR4 351 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 MIR17HGQ75NE6 70 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 RBM14Q96PK6 669 aaKnown RBP19.27■□□□□ 0.68
PABPN1-202ENST00000397276 NGBQ9NPG2 151 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 TACC2O95359 2948 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 GCHFRP30047 84 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 FOXL1Q12952 345 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 HLA-DRB5Q30154 266 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 C10orf55Q5SWW7 151 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 OCC1Q8TAD7 63 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 BET1LQ9NYM9 111 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 NBASA2RRP1 2371 aa19.27■□□□□ 0.68
PABPN1-202ENST00000397276 TPRP12270 2363 aaKnown RBP19.27■□□□□ 0.67
PABPN1-202ENST00000397276 IGHV3-48P01763 117 aa19.27■□□□□ 0.67
PABPN1-202ENST00000397276 LOXP28300 417 aaPredicted RBP19.27■□□□□ 0.67
PABPN1-202ENST00000397276 RNF114Q9Y508 228 aa19.27■□□□□ 0.67
PABPN1-202ENST00000397276 ZZEF1O43149 2961 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 IGHV3-72A0A0B4J1Y9 119 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.26■□□□□ 0.67
PABPN1-202ENST00000397276 FAM90A27PA6NNH2 459 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 SERF1AO75920 110 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 TPTE2P1Q5T6R2 138 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 OSR1Q8TAX0 266 aaPredicted RBP19.26■□□□□ 0.67
PABPN1-202ENST00000397276 VN1R17PQ8TDU5 208 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 HSPB9Q9BQS6 159 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 F6UZH7 168 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 DLEU1O43261 78 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 LINC00869P0C866 280 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 GRNP28799 593 aaKnown RBP19.26■□□□□ 0.67
PABPN1-202ENST00000397276 TMEM249Q2WGJ8 235 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 OR9G1Q8NH87 305 aa19.26■□□□□ 0.67
PABPN1-202ENST00000397276 RPL8P62917 257 aaKnown RBP19.25■□□□□ 0.67
PABPN1-202ENST00000397276 PRR20EP86478 221 aa19.25■□□□□ 0.67
PABPN1-202ENST00000397276 PRR20CP86479 221 aa19.25■□□□□ 0.67
PABPN1-202ENST00000397276 PRR20DP86480 221 aa19.25■□□□□ 0.67
PABPN1-202ENST00000397276 PRR20BP86481 221 aa19.25■□□□□ 0.67
PABPN1-202ENST00000397276 PRR20AP86496 221 aa19.25■□□□□ 0.67
PABPN1-202ENST00000397276 OR5AN1Q8NGI8 311 aa19.25■□□□□ 0.67
PABPN1-202ENST00000397276 IGHV1-69-2A0A0G2JMI3 117 aa19.25■□□□□ 0.67
PABPN1-202ENST00000397276 MDFIC2A0A1B0GVS7 189 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms