RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SPACA3Q8IXA5 215 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 OR8B3Q8NGG8 313 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 OR8B2Q96RD0 313 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 IGFBP2P18065 325 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 ERVK-16P61578 105 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 TBR1Q16650 682 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 VWA1Q6PCB0 445 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 SLC24A4Q8NFF2 622 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 OR2Z1Q8NG97 314 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 FAM168AQ92567 244 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 VPS25Q9BRG1 176 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 TP73-AS1Q9UF72 201 aa19.68■□□□□ 0.74
CSNK1E-203ENST00000396832 FAM90A9PA6NNJ1 464 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 C15orf65H3BRN8 121 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 GABRA6Q16445 453 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 SPRNQ5BIV9 151 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 TMEM167BQ9NRX6 74 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 CACNA1GO43497 2377 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 CACNA1HO95180 2353 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 ACP1P24666 158 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 UBE2G1P62253 170 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 SMIM21Q3B7S5 101 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 FAM214BQ7L5A3 538 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 SSBP3Q9BWW4 388 aaPredicted RBP19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 TCF19Q9Y242 345 aa19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 COL27A1Q8IZC6 1860 aaPredicted RBP19.67■□□□□ 0.74
CSNK1E-203ENST00000396832 NHLRC2Q8NBF2 726 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 NEUROG1Q92886 237 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 ST6GALNAC6Q969X2 333 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 HOXC12P31275 282 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 PRR20EP86478 221 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 PRR20CP86479 221 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 PRR20DP86480 221 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 PRR20BP86481 221 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 PRR20AP86496 221 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 LDLRAD2Q5SZI1 272 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 UBALD2Q8IYN6 164 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 CXXC4Q9H2H0 198 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 PRDX2P32119 198 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 MPV17L2Q567V2 206 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 LRRC10Q5BKY1 277 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 SLC25A10Q9UBX3 287 aaPredicted RBP19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 ARL2-SNX15V9GYD0 113 aa19.66■□□□□ 0.74
CSNK1E-203ENST00000396832 C2orf70A6NJV1 201 aa19.65■□□□□ 0.74
CSNK1E-203ENST00000396832 ZNF891A8MT65 544 aaPredicted RBP19.65■□□□□ 0.74
CSNK1E-203ENST00000396832 GGTLC3B5MD39 225 aa19.65■□□□□ 0.74
CSNK1E-203ENST00000396832 RNASEKQ6P5S7 137 aaKnown RBP19.65■□□□□ 0.74
CSNK1E-203ENST00000396832 SPATA12Q7Z6I5 190 aa19.65■□□□□ 0.74
CSNK1E-203ENST00000396832 MDS2Q8NDY4 140 aa19.65■□□□□ 0.74
CSNK1E-203ENST00000396832 S1PR3Q99500 378 aa19.65■□□□□ 0.74
CSNK1E-203ENST00000396832 KIR3DL3Q8N743 410 aa19.65■□□□□ 0.74
CSNK1E-203ENST00000396832 ZNF503Q96F45 646 aa19.65■□□□□ 0.74
CSNK1E-203ENST00000396832 ARRDC1-AS1Q9H2J1 176 aa19.65■□□□□ 0.74
CSNK1E-203ENST00000396832 PPOXP50336 477 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 RHOGP84095 191 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 SPRY4Q9C004 299 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 CST9LQ9H4G1 147 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 PLEKHA3Q9HB20 300 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 TNFRSF19Q9NS68 423 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 MGAQ8IWI9 3026 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 OR7C2O60412 319 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 CECR9P0C854 216 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 CD46P15529 392 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 RPL8P62917 257 aaKnown RBP19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 ZNRD1Q9P1U0 126 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 CLCF1Q9UBD9 225 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 DSCAMO60469 2012 aa19.64■□□□□ 0.73
CSNK1E-203ENST00000396832 NPY1RP25929 384 aa19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 MFAP2P55001 183 aa19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 GDF5OSQ5U4N7 250 aa19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 DUX4L9Q6RFH8 374 aaPredicted RBP19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 IGF2BP2-AS1Q96M15 143 aa19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 NABP2Q9BQ15 211 aa19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 IGKV1D-17A0A075B6S4 117 aa19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 GPR6P46095 362 aaPredicted RBP19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 VHLLQ6RSH7 139 aa19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 DHRS13Q6UX07 377 aa19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 SMIM15Q7Z3B0 74 aa19.63■□□□□ 0.73
CSNK1E-203ENST00000396832 PSG1P11464 419 aa19.62■□□□□ 0.73
CSNK1E-203ENST00000396832 OCIAD2Q56VL3 154 aa19.62■□□□□ 0.73
CSNK1E-203ENST00000396832 TMEM164Q5U3C3 297 aa19.62■□□□□ 0.73
CSNK1E-203ENST00000396832 DMXL1Q9Y485 3027 aa19.62■□□□□ 0.73
CSNK1E-203ENST00000396832 NAV3Q8IVL0 2385 aa19.62■□□□□ 0.73
CSNK1E-203ENST00000396832 TAX1BP3O14907 124 aa19.62■□□□□ 0.73
CSNK1E-203ENST00000396832 WASHC3Q9Y3C0 194 aa19.62■□□□□ 0.73
CSNK1E-203ENST00000396832 PLXNB1O43157 2135 aa19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 MLANAQ16655 118 aa19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 WIPF2Q8TF74 440 aaPredicted RBP19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 SAP30LQ9HAJ7 183 aa19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 CLEC5AQ9NY25 188 aa19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 IFI27L2Q9H2X8 130 aa19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 ADGRG4Q8IZF6 3080 aa19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 TRGV8A0A0C4DH27 118 aa19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 KLF5Q13887 457 aaPredicted RBP19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 SSBP4Q9BWG4 385 aaPredicted RBP19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 ZNF355PQ9NSJ1 428 aa19.61■□□□□ 0.73
CSNK1E-203ENST00000396832 OR4A47Q6IF82 309 aa19.6■□□□□ 0.73
CSNK1E-203ENST00000396832 COMMD5Q9GZQ3 224 aa19.6■□□□□ 0.73
CSNK1E-203ENST00000396832 NUDT3O95989 172 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 533.8 ms