RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 LINC00173Q6ZV60 143 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 MDP1Q86V88 176 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 Q8IYB0 196 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 KCNE4Q8WWG9 221 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 ASCL2Q99929 193 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SF3B5Q9BWJ5 86 aaKnown RBP14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CRISPLD2Q9H0B8 497 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CHCHD2Q9Y6H1 151 aaPredicted RBP14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PCDH15Q96QU1 1955 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 IGHV2-26A0A0B4J1V2 119 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 DCAF12Q5T6F0 453 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 C10orf113Q5VZT2 155 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 EBLN2Q6P2I7 272 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 REPIN1Q9BWE0 567 aaKnown RBP14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 TP53TG3Q9ULZ0 132 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 C8orf88P0DMB2 117 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CT45A6P0DMU7 189 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CT45A5P0DMU8 189 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CT45A7P0DMV0 189 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SRD5A2P31213 254 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CT45A1Q5HYN5 189 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CT45A3Q8NHU0 189 aa14.14□□□□□ -0.15
TRAF3IP1-202ENST00000391993 YLPM1P49750 1951 aaKnown RBP14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CD46P15529 392 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 FAM168AQ92567 244 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 OR51B2Q9Y5P1 312 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SPEGQ15772 3267 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 IGLC7A0M8Q6 106 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 C15orf62A8K5M9 175 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 M0R296 226 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SPRY3O43610 288 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 REG1AP05451 166 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 ADH4P08319 380 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 OR9G1Q8NH87 305 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 IGHV1OR15-9A0A0B4J2B8 117 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 TMPRSS2O15393 492 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 HBBP68871 147 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PRSS57Q6UWY2 283 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 TMEM144Q7Z5S9 345 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 OR13A1Q8NGR1 328 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 TNFRSF19Q9NS68 423 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 RALYQ9UKM9 306 aaKnown RBP14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 USP34Q70CQ2 3546 aa14.13□□□□□ -0.15
TRAF3IP1-202ENST00000391993 H3BVH4 76 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PAX2Q02962 417 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 KIR3DL3Q8N743 410 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 OR52E5Q8NH55 327 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 A0A0G2JLM5 398 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 LINC00473A8K010 186 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 MLNRO43193 412 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 LIPFP07098 398 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 MAGEA5P43359 124 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SRSF12Q8WXF0 261 aaKnown RBP14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SNRNP40Q96DI7 357 aaKnown RBP14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SIGMAR1Q99720 223 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 HIF1ANQ9NWT6 349 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 RIF1Q5UIP0 2472 aaKnown RBP14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PRSS47A8MTI9 375 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 K7EQM0 130 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SARAFQ96BY9 339 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 MRPS17Q9Y2R5 130 aaKnown RBP14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 COL4A4P53420 1690 aaPredicted RBP14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SYS1-DBNDD2H3BUS1 97 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 K7EP13 123 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 LYZP61626 148 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CFHR1Q03591 330 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 HCP5Q6MZN7 132 aa14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 NHP2Q9NX24 153 aaKnown RBP14.12□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PSPNO60542 156 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 TGFAP01135 160 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 ZBTB34Q8NCN2 500 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 NUP35Q8NFH5 326 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 OSTCQ9NRP0 149 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PPIAL4EA0A075B759 164 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 MOSP00540 346 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PPIAL4FP0DN26 164 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 GUSBP1Q15486 140 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 BVES-AS1Q5T3Y7 98 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SSC4DQ8WTU2 575 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 DNASE2BQ8WZ79 361 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 V9GYV3 84 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 LOC107984156A0A0G2JMH3 177 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 HIST1H1AQ02539 215 aaPredicted RBP14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 ARL17AQ8IVW1 177 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 NFAM1Q8NET5 270 aaPredicted RBP14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 ST20Q9HBF5 79 aa14.11□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PPIAL4CA0A0B4J2A2 164 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PPIAL4GP0DN37 164 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 ESDP10768 282 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 NPIPB3Q92617 1050 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 HES7Q9BYE0 225 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PRDM14Q9GZV8 571 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 RBP4P02753 201 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 LCNL1Q6ZST4 164 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SPACA3Q8IXA5 215 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 TEX45Q8NA69 505 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 C11orf1Q9H5F2 150 aa14.1□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SCGB2A1O75556 95 aa14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 MEF2CQ06413 473 aaPredicted RBP14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 ZNRF1Q8ND25 227 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms